Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310117

Identifier: 18310117

GI number: 18310117

Start: 1331702

End: 1331944

Strand: Direct

Name: 18310117

Synonym: CPE1135

Alternate gene names: NA

Gene position: 1331702-1331944 (Clockwise)

Preceding gene: 18310116

Following gene: 18310118

Centisome position: 43.93

GC content: 31.69

Gene sequence:

>243_bases
ATGAATTTAAGATTAATGTTTGAAAGAATTATAAAGAGAGGATATTTCCCAGAAGGAAAAGAGAATTTTGGTAAGAAACT
AGACTTTATGTATGGACTAAATAGATTAACAGACGATGATTATGCTTATCTAGTTGGATTATTAAATCCAGTTCCAGTGG
TAACTCCATTGCCAGCAGATCATGAAACAAGTTCAGTAGTAGTTGCTCCAACAGAAACTAAAGTTATAGAATCACAAGCT
TAA

Upstream 100 bases:

>100_bases
AATCTTATAGATACATTAGTATTACCTAATATACTACAGAATACAACAGATATAGAAATGTTAAAATTAGAAAAATTAAA
ATAAGAAAGGATGATGTAAA

Downstream 100 bases:

>100_bases
TAAATAAAATAGCAAGGAAATAAGTTAAGGCTAGAGATAGTCTTTTTTTATTTCCTTAAATTATAGAAAGGAGAGTGAAC
TATGAATGATGAACTAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MNLRLMFERIIKRGYFPEGKENFGKKLDFMYGLNRLTDDDYAYLVGLLNPVPVVTPLPADHETSSVVVAPTETKVIESQA

Sequences:

>Translated_80_residues
MNLRLMFERIIKRGYFPEGKENFGKKLDFMYGLNRLTDDDYAYLVGLLNPVPVVTPLPADHETSSVVVAPTETKVIESQA
>Mature_80_residues
MNLRLMFERIIKRGYFPEGKENFGKKLDFMYGLNRLTDDDYAYLVGLLNPVPVVTPLPADHETSSVVVAPTETKVIESQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9061; Mature: 9061

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRLMFERIIKRGYFPEGKENFGKKLDFMYGLNRLTDDDYAYLVGLLNPVPVVTPLPAD
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEECCCCCC
HETSSVVVAPTETKVIESQA
CCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNLRLMFERIIKRGYFPEGKENFGKKLDFMYGLNRLTDDDYAYLVGLLNPVPVVTPLPAD
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEECCCCCC
HETSSVVVAPTETKVIESQA
CCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA