Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310091

Identifier: 18310091

GI number: 18310091

Start: 1309449

End: 1309904

Strand: Direct

Name: 18310091

Synonym: CPE1109

Alternate gene names: NA

Gene position: 1309449-1309904 (Clockwise)

Preceding gene: 18310090

Following gene: 18310092

Centisome position: 43.2

GC content: 23.25

Gene sequence:

>456_bases
ATGATAAAAGAATTAGAAAGAATACTAACAAAAAAATTAAAACATCAAATATTTATTGATGATGAGTTTTCTGTAAAGAT
AACTAAGCAAAAGTTAGGATATAAGTTATCTATTAAATCTACAGATAATAAAATAGAATTATTTGCTGATGTTTTAGAAG
ATATAGATTTAAGTCAACTTATGTATTTATTTATTAAGAATCTTTATTATACAGAAGTTAATTGGAGAACTAAAGAAATA
CATAGAACTAATAGTTTCTTGTATAGAAAGGCTAAACAATTAGCTACTTGGAGTGCTAGAAATAATAAAGATAAAGTAGA
GAAGATTAACAAAGAAATAGTAGAAAGATATAAAGAAACAGAAAATTTAAAACAAGAAGTTGCTTATTATAAGCAATTTG
TTAGTGTTTTCTATGATATAAAAACAGATATAGAAGAATGGGAGTGGCTTAGATAG

Upstream 100 bases:

>100_bases
TGCACACATCATAAAGCAACTCTATACCAATTAGAGATTACTATTAATTTAGTAGTCTTTTTTTTATTACAAAAATATTA
TACGAAGGTGGTATGTAAAA

Downstream 100 bases:

>100_bases
ACACTCTTTTTTTATACCCTTTTTTCTTAAGAATTAAGGCTAGTAGATAATAGTTACTCTTTATAATTAAATATCAAATT
TAGTAATCCTTTAGCTAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MIKELERILTKKLKHQIFIDDEFSVKITKQKLGYKLSIKSTDNKIELFADVLEDIDLSQLMYLFIKNLYYTEVNWRTKEI
HRTNSFLYRKAKQLATWSARNNKDKVEKINKEIVERYKETENLKQEVAYYKQFVSVFYDIKTDIEEWEWLR

Sequences:

>Translated_151_residues
MIKELERILTKKLKHQIFIDDEFSVKITKQKLGYKLSIKSTDNKIELFADVLEDIDLSQLMYLFIKNLYYTEVNWRTKEI
HRTNSFLYRKAKQLATWSARNNKDKVEKINKEIVERYKETENLKQEVAYYKQFVSVFYDIKTDIEEWEWLR
>Mature_151_residues
MIKELERILTKKLKHQIFIDDEFSVKITKQKLGYKLSIKSTDNKIELFADVLEDIDLSQLMYLFIKNLYYTEVNWRTKEI
HRTNSFLYRKAKQLATWSARNNKDKVEKINKEIVERYKETENLKQEVAYYKQFVSVFYDIKTDIEEWEWLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18502; Mature: 18502

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKELERILTKKLKHQIFIDDEFSVKITKQKLGYKLSIKSTDNKIELFADVLEDIDLSQL
CHHHHHHHHHHHHHHHEEECCCCEEEEEHHHCCEEEEECCCCCHHHHHHHHHHCCCHHHH
MYLFIKNLYYTEVNWRTKEIHRTNSFLYRKAKQLATWSARNNKDKVEKINKEIVERYKET
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ENLKQEVAYYKQFVSVFYDIKTDIEEWEWLR
HHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
>Mature Secondary Structure
MIKELERILTKKLKHQIFIDDEFSVKITKQKLGYKLSIKSTDNKIELFADVLEDIDLSQL
CHHHHHHHHHHHHHHHEEECCCCEEEEEHHHCCEEEEECCCCCHHHHHHHHHHCCCHHHH
MYLFIKNLYYTEVNWRTKEIHRTNSFLYRKAKQLATWSARNNKDKVEKINKEIVERYKET
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ENLKQEVAYYKQFVSVFYDIKTDIEEWEWLR
HHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA