Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310092

Identifier: 18310092

GI number: 18310092

Start: 1310119

End: 1311216

Strand: Direct

Name: 18310092

Synonym: CPE1110

Alternate gene names: NA

Gene position: 1310119-1311216 (Clockwise)

Preceding gene: 18310091

Following gene: 18310093

Centisome position: 43.22

GC content: 27.78

Gene sequence:

>1098_bases
ATGAAGGAATTACAATTATTAACAGAAAAAGAAGTATTAAAAGGACAAAACATAACAATTTATGGGACAGGAGAAAATCC
ATTATTTCTAGCTAGAGATGTAGCAAATATAATAGGACATTCTAAAGCAAGAGATATGATAGCAGATGTAGATGAAGATG
AAAAAATAAAGATGCCTTTTAAAATGGCGTCTTCAAGATCAACACAGTCTCAATGGTTTTTAACAGAAGATGGACTTTAT
GAAGTATTACTTACAAGTAGAAAACCTGTTGCAAAACAATTCAGAAAAGAAGTTAAGAAAATTCTTAAACAACTAAGACA
AAAAGGCGTTGTAATACTAGAGAATGCTACTAAAGAAGCTATTAATTTCGAAGAGAAGTTTGGTACATACAGAATTAGAA
AAACATTCTTAAACTCTACAAATATTACAGAAGATTATAAATTATTTACAGAGTTATCTAAACAAGAATGGAAAGCTAAA
AGATTAAATAATGATGATAGAGTTAAACTATCTAAGCTAATTGTCAAAGGTTTAGAACAAAGACTAAATAGAGATAAGTC
TAAATTAAGAGCAAGTGAAATGTTAGCTATGCAGGAATTATTAACTGATATAAATAAAGATATTATTAAACTGGAAAATA
AAAAACATGGAGGTTTGAAAACGGGGCAACAGAAGCAGATAACTAAATTAAAGCAACAATTAGAAGATATAGAAACTAAA
TATGTTGTTAGAGATGAAGAATTTGTGACGTTAGATTGTCATGGCTTTAGTAATAATTATATGTATAGCTATATAGAAGG
TAAATGCGTTAAGTCTAATGCATATAAAAATTGGATTAAATATTTTCCTTATAATCAAGTGCCAGATGTCGATTATTGGG
ATGTAGACTTTACTAAACCTGTCGAGATGTTTATAAACTACATAGCAAAGAAAGATGTAGATATTCAAAATTTAGATAAG
TCATTTATTGACCGTATTTTTGATATATATAATTTTAATGACAATATAGTACAAGCAGTACATAGACAAAGCATCGGAAC
TGTAGATAATTTTGCAGACGGAAAAATATCTTTTTACATAAGAAATATAGAAGAATAG

Upstream 100 bases:

>100_bases
CAAGCTAAGAAAGTTAGATCATAGGTGGGTTTATTACACAGTTAAGATGTTCTGTGTTATCAAAAACATCAAAAATTTAT
TATAAAGGGGATATTAAAAA

Downstream 100 bases:

>100_bases
TAGGTGATTATACAATGATAATTGATTATGTTTATTTATTAATATTTGCATTGTTTATTTTGACAATTTATAAAGTCGCA
AAGATAGAAAATAAATGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: BRO Family N- Domain-Containing Protein; Phage Protein; Antirepressor; Bacteriophage Antirepressor; Phage Antirepressor

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MKELQLLTEKEVLKGQNITIYGTGENPLFLARDVANIIGHSKARDMIADVDEDEKIKMPFKMASSRSTQSQWFLTEDGLY
EVLLTSRKPVAKQFRKEVKKILKQLRQKGVVILENATKEAINFEEKFGTYRIRKTFLNSTNITEDYKLFTELSKQEWKAK
RLNNDDRVKLSKLIVKGLEQRLNRDKSKLRASEMLAMQELLTDINKDIIKLENKKHGGLKTGQQKQITKLKQQLEDIETK
YVVRDEEFVTLDCHGFSNNYMYSYIEGKCVKSNAYKNWIKYFPYNQVPDVDYWDVDFTKPVEMFINYIAKKDVDIQNLDK
SFIDRIFDIYNFNDNIVQAVHRQSIGTVDNFADGKISFYIRNIEE

Sequences:

>Translated_365_residues
MKELQLLTEKEVLKGQNITIYGTGENPLFLARDVANIIGHSKARDMIADVDEDEKIKMPFKMASSRSTQSQWFLTEDGLY
EVLLTSRKPVAKQFRKEVKKILKQLRQKGVVILENATKEAINFEEKFGTYRIRKTFLNSTNITEDYKLFTELSKQEWKAK
RLNNDDRVKLSKLIVKGLEQRLNRDKSKLRASEMLAMQELLTDINKDIIKLENKKHGGLKTGQQKQITKLKQQLEDIETK
YVVRDEEFVTLDCHGFSNNYMYSYIEGKCVKSNAYKNWIKYFPYNQVPDVDYWDVDFTKPVEMFINYIAKKDVDIQNLDK
SFIDRIFDIYNFNDNIVQAVHRQSIGTVDNFADGKISFYIRNIEE
>Mature_365_residues
MKELQLLTEKEVLKGQNITIYGTGENPLFLARDVANIIGHSKARDMIADVDEDEKIKMPFKMASSRSTQSQWFLTEDGLY
EVLLTSRKPVAKQFRKEVKKILKQLRQKGVVILENATKEAINFEEKFGTYRIRKTFLNSTNITEDYKLFTELSKQEWKAK
RLNNDDRVKLSKLIVKGLEQRLNRDKSKLRASEMLAMQELLTDINKDIIKLENKKHGGLKTGQQKQITKLKQQLEDIETK
YVVRDEEFVTLDCHGFSNNYMYSYIEGKCVKSNAYKNWIKYFPYNQVPDVDYWDVDFTKPVEMFINYIAKKDVDIQNLDK
SFIDRIFDIYNFNDNIVQAVHRQSIGTVDNFADGKISFYIRNIEE

Specific function: Unknown

COG id: COG3617

COG function: function code K; Prophage antirepressor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42845; Mature: 42845

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELQLLTEKEVLKGQNITIYGTGENPLFLARDVANIIGHSKARDMIADVDEDEKIKMPF
CCCHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHCCHHHHHHHHCCCCCCEEECCH
KMASSRSTQSQWFLTEDGLYEVLLTSRKPVAKQFRKEVKKILKQLRQKGVVILENATKEA
HHHCCCCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHH
INFEEKFGTYRIRKTFLNSTNITEDYKLFTELSKQEWKAKRLNNDDRVKLSKLIVKGLEQ
HCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RLNRDKSKLRASEMLAMQELLTDINKDIIKLENKKHGGLKTGQQKQITKLKQQLEDIETK
HHCCCHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
YVVRDEEFVTLDCHGFSNNYMYSYIEGKCVKSNAYKNWIKYFPYNQVPDVDYWDVDFTKP
EEEECCCEEEEEECCCCCCEEEEEECCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCH
VEMFINYIAKKDVDIQNLDKSFIDRIFDIYNFNDNIVQAVHRQSIGTVDNFADGKISFYI
HHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEE
RNIEE
ECCCC
>Mature Secondary Structure
MKELQLLTEKEVLKGQNITIYGTGENPLFLARDVANIIGHSKARDMIADVDEDEKIKMPF
CCCHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHCCHHHHHHHHCCCCCCEEECCH
KMASSRSTQSQWFLTEDGLYEVLLTSRKPVAKQFRKEVKKILKQLRQKGVVILENATKEA
HHHCCCCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHH
INFEEKFGTYRIRKTFLNSTNITEDYKLFTELSKQEWKAKRLNNDDRVKLSKLIVKGLEQ
HCHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RLNRDKSKLRASEMLAMQELLTDINKDIIKLENKKHGGLKTGQQKQITKLKQQLEDIETK
HHCCCHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
YVVRDEEFVTLDCHGFSNNYMYSYIEGKCVKSNAYKNWIKYFPYNQVPDVDYWDVDFTKP
EEEECCCEEEEEECCCCCCEEEEEECCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCH
VEMFINYIAKKDVDIQNLDKSFIDRIFDIYNFNDNIVQAVHRQSIGTVDNFADGKISFYI
HHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEE
RNIEE
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA