Click here to switch to the map view.

The map label for this gene is 18310079

Identifier: 18310079

GI number: 18310079

Start: 1300313

End: 1300525

Strand: Reverse

Name: 18310079

Synonym: CPE1097

Alternate gene names: NA

Gene position: 1300525-1300313 (Counterclockwise)

Preceding gene: 18310121

Following gene: 18310073

Centisome position: 42.9

GC content: 27.23

Gene sequence:

>213_bases
ATGATAAAAACAAATTTACATATAGAATTAGCAAAAGCAAGAATGACAAGAAAGGAACTTTCAAAGGTTACTGGAATTAG
AGAATCTACGATTAGTGGTTATGCAAACAATAAATATGTATATATAGCAAAAGATCATATTGATAAGATATGTCGAGTTC
TTAATTGCACACCTAATGATTTATTTGAATACATTCCAGATGATGAAGAATAA

Upstream 100 bases:

>100_bases
TTGTAAACCCTTATTTTAAATTTTTTTTAAAATTTTCCTGTTATTATTAGTTATATATCAACGAATAATGATATAATATA
TATGAAAGGAGTTGATATAT

Downstream 100 bases:

>100_bases
AGATAGGATCTAGTCTTATGGCTAGGTCTTATTTTTTTGCATAAGAAAAAGCTACATAAATAACATGCAGCATATATCTA
AGTTGGATGTCGGTTAAATC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MIKTNLHIELAKARMTRKELSKVTGIRESTISGYANNKYVYIAKDHIDKICRVLNCTPNDLFEYIPDDEE

Sequences:

>Translated_70_residues
MIKTNLHIELAKARMTRKELSKVTGIRESTISGYANNKYVYIAKDHIDKICRVLNCTPNDLFEYIPDDEE
>Mature_70_residues
MIKTNLHIELAKARMTRKELSKVTGIRESTISGYANNKYVYIAKDHIDKICRVLNCTPNDLFEYIPDDEE

Specific function: Unknown

COG id: COG3655

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8131; Mature: 8131

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTNLHIELAKARMTRKELSKVTGIRESTISGYANNKYVYIAKDHIDKICRVLNCTPND
CCCCCCCEEHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCHHH
LFEYIPDDEE
HHHCCCCCCC
>Mature Secondary Structure
MIKTNLHIELAKARMTRKELSKVTGIRESTISGYANNKYVYIAKDHIDKICRVLNCTPND
CCCCCCCEEHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCHHH
LFEYIPDDEE
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA