Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310073

Identifier: 18310073

GI number: 18310073

Start: 1292677

End: 1293069

Strand: Reverse

Name: 18310073

Synonym: CPE1091

Alternate gene names: NA

Gene position: 1293069-1292677 (Counterclockwise)

Preceding gene: 18310079

Following gene: 18310072

Centisome position: 42.66

GC content: 25.7

Gene sequence:

>393_bases
ATGTATTTTCAAGAATTATACGATTCAAGCAATATGAGCATTTTAATTGCATTTATATTCTACTTAATAAGAATCTACCC
AAGTTATGTTATGGCTAAGAAAGCTAACTTAAAACATTCATGGATGATGTTCTTTCCTGTACTTGGAGAATTTCAGATGT
TACATTTAGCAGGATTATCATACTTATATTTTATAATTTATTTAATACCAGTTGCTAGATTTATACTTTTTGTAATTGTA
TTTTATAGAATACTTAGAAATTTTGGATTTGGACTATTTATGACTATATTAGGAATCATATTTTCTTTTATAGCATTCTT
AACATTCTGGTATATTGTCCTAACTGATAGAGAATTTATAGGAGATATTCCACGTGAGTATCAAGAATTTTAA

Upstream 100 bases:

>100_bases
TAAGCCCTTTTTTCATATAATTAATACCTTCTTATTATTAGCTGTTTTTAATTTTTTTATAAACTTTATGATATAATTAA
AACAAAGGAGGGAAACTATT

Downstream 100 bases:

>100_bases
AAAGGCTCTGTTTTAAGTTTATATTTATTTTCATAAATTACTTAAAACAAAGTAAGTAAAAAAACTAGAGTAGAAAAATT
ATCTTCTCTAGTTTTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MYFQELYDSSNMSILIAFIFYLIRIYPSYVMAKKANLKHSWMMFFPVLGEFQMLHLAGLSYLYFIIYLIPVARFILFVIV
FYRILRNFGFGLFMTILGIIFSFIAFLTFWYIVLTDREFIGDIPREYQEF

Sequences:

>Translated_130_residues
MYFQELYDSSNMSILIAFIFYLIRIYPSYVMAKKANLKHSWMMFFPVLGEFQMLHLAGLSYLYFIIYLIPVARFILFVIV
FYRILRNFGFGLFMTILGIIFSFIAFLTFWYIVLTDREFIGDIPREYQEF
>Mature_130_residues
MYFQELYDSSNMSILIAFIFYLIRIYPSYVMAKKANLKHSWMMFFPVLGEFQMLHLAGLSYLYFIIYLIPVARFILFVIV
FYRILRNFGFGLFMTILGIIFSFIAFLTFWYIVLTDREFIGDIPREYQEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15726; Mature: 15726

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFQELYDSSNMSILIAFIFYLIRIYPSYVMAKKANLKHSWMMFFPVLGEFQMLHLAGLS
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
YLYFIIYLIPVARFILFVIVFYRILRNFGFGLFMTILGIIFSFIAFLTFWYIVLTDREFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
GDIPREYQEF
CCCHHHHHCC
>Mature Secondary Structure
MYFQELYDSSNMSILIAFIFYLIRIYPSYVMAKKANLKHSWMMFFPVLGEFQMLHLAGLS
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
YLYFIIYLIPVARFILFVIVFYRILRNFGFGLFMTILGIIFSFIAFLTFWYIVLTDREFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
GDIPREYQEF
CCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA