| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is hisB [H]
Identifier: 18310038
GI number: 18310038
Start: 1262188
End: 1263012
Strand: Direct
Name: hisB [H]
Synonym: CPE1056
Alternate gene names: 18310038
Gene position: 1262188-1263012 (Clockwise)
Preceding gene: 18310037
Following gene: 18310041
Centisome position: 41.64
GC content: 30.18
Gene sequence:
>825_bases ATGATTTTAAACACAAAAAGAGATGGACATGTTCATAGTACTTATTGCCCACATGGTAGCAATGATACTCTAGATATGTA CATTGATACTGCATTAAAAAATGGGATTACAGAAATAACTTTTACAGAACATATGCCACTACCTATGGAAGACCCTTCAC CAAGAAAAAACAGTGCTTTACCTATGGAAAGATTAGAGGAGTACATAAAAGGAATAACTGAGCTAAAAGAAAAGGTTAAG GATAAAATTAAAGTTAATCTAGGCTTAGAGGTTGATTATGTGGAAGGGTATGAAGAAGAGACTAAAGCTATATTAAATAA ATATGGAAAATATTTAGATGATGCAATTCTTTCAGTTCATATAGTGAAGTTTCAAGGAGAGTATTACCAAATAGGTAATG GATCAGATATGATTGGTGAATTAGTAGAGAAAATTGGCGGAATGGACAAGCTTTATGATCTATACTATGAAACTATGTTA AAGTCAATTAAATGCGATCTAGGAGCCTTTAAACCTAAAAGAATAGGACATCCAACTTTAGTTAGAAAGTATAAAGCAGA TTTTCCTAATGAAAAATATAATATTAAGCTTTTAGAGAGTATTCTAAAAGAAATGAAAAAAGGAAATTATGAAATTGATT TAAATACTTCAGGTCTTAGAAGAGAGAAATGTGGAGAGGTACATCCTCAAGGAATATTTTTAGATTTATGTTTAAAGTAT AATATACCTATGGTATTAGGATCTGATTCTCATAGTTCAAAATATGTTGGAGTAGAGTTTGAGAAGGTTGCAAATATGAT TTTTCCAGATTCAGAAGCAATATAA
Upstream 100 bases:
>100_bases GTTTATTTTTAGAGTTTTTAATTTTTTAAATCTAAGTTAATCTTTTTATTAAGATTTTAGATTTTGACAAAATTTATAGC AGCATAATACGGAGGATAAA
Downstream 100 bases:
>100_bases AAGACACTATAACTTATATAAATTTATTGAAAAATTTGTATGAGAAGAGATTTTAAAATAATTATCTATAAAGTTTTAAT TTATAGATAATAAAAAAGCA
Product: histidinol-phosphatase
Products: NA
Alternate protein names: HolPase [H]
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MILNTKRDGHVHSTYCPHGSNDTLDMYIDTALKNGITEITFTEHMPLPMEDPSPRKNSALPMERLEEYIKGITELKEKVK DKIKVNLGLEVDYVEGYEEETKAILNKYGKYLDDAILSVHIVKFQGEYYQIGNGSDMIGELVEKIGGMDKLYDLYYETML KSIKCDLGAFKPKRIGHPTLVRKYKADFPNEKYNIKLLESILKEMKKGNYEIDLNTSGLRREKCGEVHPQGIFLDLCLKY NIPMVLGSDSHSSKYVGVEFEKVANMIFPDSEAI
Sequences:
>Translated_274_residues MILNTKRDGHVHSTYCPHGSNDTLDMYIDTALKNGITEITFTEHMPLPMEDPSPRKNSALPMERLEEYIKGITELKEKVK DKIKVNLGLEVDYVEGYEEETKAILNKYGKYLDDAILSVHIVKFQGEYYQIGNGSDMIGELVEKIGGMDKLYDLYYETML KSIKCDLGAFKPKRIGHPTLVRKYKADFPNEKYNIKLLESILKEMKKGNYEIDLNTSGLRREKCGEVHPQGIFLDLCLKY NIPMVLGSDSHSSKYVGVEFEKVANMIFPDSEAI >Mature_274_residues MILNTKRDGHVHSTYCPHGSNDTLDMYIDTALKNGITEITFTEHMPLPMEDPSPRKNSALPMERLEEYIKGITELKEKVK DKIKVNLGLEVDYVEGYEEETKAILNKYGKYLDDAILSVHIVKFQGEYYQIGNGSDMIGELVEKIGGMDKLYDLYYETML KSIKCDLGAFKPKRIGHPTLVRKYKADFPNEKYNIKLLESILKEMKKGNYEIDLNTSGLRREKCGEVHPQGIFLDLCLKY NIPMVLGSDSHSSKYVGVEFEKVANMIFPDSEAI
Specific function: Unknown
COG id: COG1387
COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PHP hydrolase family. HisK subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010140 - InterPro: IPR004013 - InterPro: IPR016195 [H]
Pfam domain/function: PF02811 PHP [H]
EC number: =3.1.3.15 [H]
Molecular weight: Translated: 31307; Mature: 31307
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILNTKRDGHVHSTYCPHGSNDTLDMYIDTALKNGITEITFTEHMPLPMEDPSPRKNSAL CCCCCCCCCCEECCCCCCCCCCCHHHEEHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCC PMERLEEYIKGITELKEKVKDKIKVNLGLEVDYVEGYEEETKAILNKYGKYLDDAILSVH CHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHEEE IVKFQGEYYQIGNGSDMIGELVEKIGGMDKLYDLYYETMLKSIKCDLGAFKPKRIGHPTL EEEECCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH VRKYKADFPNEKYNIKLLESILKEMKKGNYEIDLNTSGLRREKCGEVHPQGIFLDLCLKY HHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCCCCCCCEEEEEHHHC NIPMVLGSDSHSSKYVGVEFEKVANMIFPDSEAI CCCEEECCCCCCCCEECEEHHHHHHHHCCCCCCC >Mature Secondary Structure MILNTKRDGHVHSTYCPHGSNDTLDMYIDTALKNGITEITFTEHMPLPMEDPSPRKNSAL CCCCCCCCCCEECCCCCCCCCCCHHHEEHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCC PMERLEEYIKGITELKEKVKDKIKVNLGLEVDYVEGYEEETKAILNKYGKYLDDAILSVH CHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHEEE IVKFQGEYYQIGNGSDMIGELVEKIGGMDKLYDLYYETMLKSIKCDLGAFKPKRIGHPTL EEEECCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH VRKYKADFPNEKYNIKLLESILKEMKKGNYEIDLNTSGLRREKCGEVHPQGIFLDLCLKY HHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCCCCCCCEEEEEHHHC NIPMVLGSDSHSSKYVGVEFEKVANMIFPDSEAI CCCEEECCCCCCCCEECEEHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]