Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is crcB [H]

Identifier: 18310011

GI number: 18310011

Start: 1230323

End: 1230709

Strand: Reverse

Name: crcB [H]

Synonym: CPE1029

Alternate gene names: 18310011

Gene position: 1230709-1230323 (Counterclockwise)

Preceding gene: 18310015

Following gene: 18310010

Centisome position: 40.6

GC content: 29.2

Gene sequence:

>387_bases
ATGCAAAAACTTTTACTTGCTTTAATAGTAGGACTGGGTGGATTTTTAGGTGCATCCTTGAGATATCTTATTTCAATTTT
TGCAGCCAAAAATTTTGGAGGAAACTTTCCATATGGTACTCTAATTGCCAATATTTTAGGTGCTCTTTTAATAGGTTTCA
TTATGGAATTCAGTATGGATAGTGCATTAATCTCATCTAATATGAAACTTTTTTTAACTACTGGTATTATGGGAGGCCTT
ACTACATTCTCTACTTTTTCCTATGAAACAATTAGTATGTTAACTAATGGCAATATGACTTTAGGAATAGAAAATATAAT
CTTAAACTTAGGTTGTAGTTTATTATTTGTTGTAATAGGACAAAAACTTGCTAGGATATTATTTTAA

Upstream 100 bases:

>100_bases
AGACTTATTATTCTGTAGAATTATACTTTTACTTTTTATTCAAAATTTGTTAACATTATAAAAAAGTATATTTATAATAA
TATTTAAGGAGATAATTAAA

Downstream 100 bases:

>100_bases
TTTTTAGGAGGAATCTTTTATGAGAAATGAATTTAAAGGTAGCTTTTTAAAAATATTTATTGATGAATCTGATAAGTATA
ATGGTGAGCCACTTTACTTA

Product: camphor resistance protein CrcB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MQKLLLALIVGLGGFLGASLRYLISIFAAKNFGGNFPYGTLIANILGALLIGFIMEFSMDSALISSNMKLFLTTGIMGGL
TTFSTFSYETISMLTNGNMTLGIENIILNLGCSLLFVVIGQKLARILF

Sequences:

>Translated_128_residues
MQKLLLALIVGLGGFLGASLRYLISIFAAKNFGGNFPYGTLIANILGALLIGFIMEFSMDSALISSNMKLFLTTGIMGGL
TTFSTFSYETISMLTNGNMTLGIENIILNLGCSLLFVVIGQKLARILF
>Mature_128_residues
MQKLLLALIVGLGGFLGASLRYLISIFAAKNFGGNFPYGTLIANILGALLIGFIMEFSMDSALISSNMKLFLTTGIMGGL
TTFSTFSYETISMLTNGNMTLGIENIILNLGCSLLFVVIGQKLARILF

Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem

COG id: COG0239

COG function: function code D; Integral membrane protein possibly involved in chromosome condensation

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CrcB family [H]

Homologues:

Organism=Escherichia coli, GI1786842, Length=110, Percent_Identity=38.1818181818182, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003691 [H]

Pfam domain/function: PF02537 CRCB [H]

EC number: NA

Molecular weight: Translated: 13715; Mature: 13715

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLLLALIVGLGGFLGASLRYLISIFAAKNFGGNFPYGTLIANILGALLIGFIMEFSMD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SALISSNMKLFLTTGIMGGLTTFSTFSYETISMLTNGNMTLGIENIILNLGCSLLFVVIG
HHHHHCCCCEEEHHHHHHHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH
QKLARILF
HHHHHHCC
>Mature Secondary Structure
MQKLLLALIVGLGGFLGASLRYLISIFAAKNFGGNFPYGTLIANILGALLIGFIMEFSMD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SALISSNMKLFLTTGIMGGLTTFSTFSYETISMLTNGNMTLGIENIILNLGCSLLFVVIG
HHHHHCCCCEEEHHHHHHHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH
QKLARILF
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA