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The map label for this gene is trpH [H]

Identifier: 18309997

GI number: 18309997

Start: 1218700

End: 1219542

Strand: Reverse

Name: trpH [H]

Synonym: CPE1015

Alternate gene names: 18309997

Gene position: 1219542-1218700 (Counterclockwise)

Preceding gene: 18310005

Following gene: 18309996

Centisome position: 40.23

GC content: 29.66

Gene sequence:

>843_bases
ATTAATATTAATGCAGAATTTCATTGTCACTCATTAGCTTCTGACGGAACACTATCTCCAAAAGAGGTAATTGCTGAAGC
TAAAAAATCAGGTATATCTTTAATAGCTTTAACAGATCACGATATAACCTCTGGTCTTGATGAAGCAAAAGAAGCCGCAA
AAGAATTAGATATTCAATTTATTCCTGGAATAGAACTTAGTTGTGAGCATAAAGGATCTACAATTCATATACTAGGATAT
TTTAGAGATGATTCTTATAAATCTGAAGATTTTCAAAAGTTCTTAAATGAATTAAAGGATTCTAGAATAGGTAGAGCAAA
AAAAATCGTGGCTAATTTAGAAAAATATTTTAATATTAAACTTGATTATAAAGATGTCTTAGCAAAGGGAAAAGGTGTTG
TTGCTAGGCCTCATATAGCTCAATGCATAATAGACGCTGGATATCCTTATGATTGGGAATATATATTTGATAACTTCATA
GGAAATGATAGCCCAGCTTATGTCCCTAACAAAAAAATTTCTGTAGAAGAAGGAATAAATATATTAAAAGCTAATAATGC
TATAACAGTGCTTGCTCATCCAAAGCTTATAAAAAGAGTTCCAGTAAAGGAAGTTATGGAATTTCCTTTCGATGGTATAG
AAGCTATTTACTATCAAAACACTAAAAAAGATAATGACTTCTTTATTTCATATGCTGTTCATCATGATCTTCTTATAACA
TGTGGTTCAGATTTTCATGGAGATCATGAAGGAGATGAAAGACATGGTCATGTTGGATGTATGAGTATACCAGAAGAATA
TGTTGAAAAATTCTTAAAAAAATATAATTGTAATAAAAAATAA

Upstream 100 bases:

>100_bases
GTTAAAATATTTATACTACAAATTTTTTAAAATTAACAATATTATTCAAATAATTATTTATACATACATTTACTTTTTCA
GTTTTAAAGGAGGGTTTACT

Downstream 100 bases:

>100_bases
TATTAATGATTAAAATAATGGTAATATGGTTTAACTGACAAATTACCATTATTTTTTTATAATCTCAAGTAATTTAATAT
TTTATTAAAAAAAGTATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNINAEFHCHSLASDGTLSPKEVIAEAKKSGISLIALTDHDITSGLDEAKEAAKELDIQFIPGIELSCEHKGSTIHILGY
FRDDSYKSEDFQKFLNELKDSRIGRAKKIVANLEKYFNIKLDYKDVLAKGKGVVARPHIAQCIIDAGYPYDWEYIFDNFI
GNDSPAYVPNKKISVEEGINILKANNAITVLAHPKLIKRVPVKEVMEFPFDGIEAIYYQNTKKDNDFFISYAVHHDLLIT
CGSDFHGDHEGDERHGHVGCMSIPEEYVEKFLKKYNCNKK

Sequences:

>Translated_280_residues
MNINAEFHCHSLASDGTLSPKEVIAEAKKSGISLIALTDHDITSGLDEAKEAAKELDIQFIPGIELSCEHKGSTIHILGY
FRDDSYKSEDFQKFLNELKDSRIGRAKKIVANLEKYFNIKLDYKDVLAKGKGVVARPHIAQCIIDAGYPYDWEYIFDNFI
GNDSPAYVPNKKISVEEGINILKANNAITVLAHPKLIKRVPVKEVMEFPFDGIEAIYYQNTKKDNDFFISYAVHHDLLIT
CGSDFHGDHEGDERHGHVGCMSIPEEYVEKFLKKYNCNKK
>Mature_280_residues
MNINAEFHCHSLASDGTLSPKEVIAEAKKSGISLIALTDHDITSGLDEAKEAAKELDIQFIPGIELSCEHKGSTIHILGY
FRDDSYKSEDFQKFLNELKDSRIGRAKKIVANLEKYFNIKLDYKDVLAKGKGVVARPHIAQCIIDAGYPYDWEYIFDNFI
GNDSPAYVPNKKISVEEGINILKANNAITVLAHPKLIKRVPVKEVMEFPFDGIEAIYYQNTKKDNDFFISYAVHHDLLIT
CGSDFHGDHEGDERHGHVGCMSIPEEYVEKFLKKYNCNKK

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=251, Percent_Identity=29.4820717131474, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31659; Mature: 31659

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINAEFHCHSLASDGTLSPKEVIAEAKKSGISLIALTDHDITSGLDEAKEAAKELDIQF
CCCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEEECCHHHCCHHHHHHHHHHCCEEE
IPGIELSCEHKGSTIHILGYFRDDSYKSEDFQKFLNELKDSRIGRAKKIVANLEKYFNIK
ECCCEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEE
LDYKDVLAKGKGVVARPHIAQCIIDAGYPYDWEYIFDNFIGNDSPAYVPNKKISVEEGIN
ECHHHHHHCCCCCEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEEHHHCCE
ILKANNAITVLAHPKLIKRVPVKEVMEFPFDGIEAIYYQNTKKDNDFFISYAVHHDLLIT
EEECCCEEEEEECHHHHHHCCHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEECEEEEE
CGSDFHGDHEGDERHGHVGCMSIPEEYVEKFLKKYNCNKK
ECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNINAEFHCHSLASDGTLSPKEVIAEAKKSGISLIALTDHDITSGLDEAKEAAKELDIQF
CCCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEEECCHHHCCHHHHHHHHHHCCEEE
IPGIELSCEHKGSTIHILGYFRDDSYKSEDFQKFLNELKDSRIGRAKKIVANLEKYFNIK
ECCCEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEE
LDYKDVLAKGKGVVARPHIAQCIIDAGYPYDWEYIFDNFIGNDSPAYVPNKKISVEEGIN
ECHHHHHHCCCCCEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEEHHHCCE
ILKANNAITVLAHPKLIKRVPVKEVMEFPFDGIEAIYYQNTKKDNDFFISYAVHHDLLIT
EEECCCEEEEEECHHHHHHCCHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEECEEEEE
CGSDFHGDHEGDERHGHVGCMSIPEEYVEKFLKKYNCNKK
ECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]