| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309958
Identifier: 18309958
GI number: 18309958
Start: 1176634
End: 1176987
Strand: Direct
Name: 18309958
Synonym: CPE0976
Alternate gene names: NA
Gene position: 1176634-1176987 (Clockwise)
Preceding gene: 18309957
Following gene: 18309963
Centisome position: 38.81
GC content: 23.16
Gene sequence:
>354_bases ATGGAATTAGTAAATATTTATGATGAATATAGAGAAGTAAATAAAAATTATGTGGATTTTATAGAGGAACTAGTAAATAA AAATTTTGAAGGATTCAGCGAAGATTTTGTAATGGGTAATCTAGAAAATTTTCAAAATTCCATTGGAGATTTAAAAGTAA AGGCTGATGATCTTCAGGTTGAGGAAGAAAATAAAGATAATTTAAAGGATTTAAAATATTTAATTGTTGATACATTATTC CTTACCTTTGATTTAAATAACTTTTATAAGCTTAAGGAATTTGAAAGATTTAAAATGAGATTTGCAAATTATGTTAATAA AAGAAGAAGAGATGAGATGTTAAAATCTTTTTAG
Upstream 100 bases:
>100_bases GCTAAATTATATTCATTAGACAAAAATATGTAGCTTAGTTATAATTTATAGAGAAAGTTTAAACTATTTAAGATTAATTA ATTTTCTATGAGGTGAAGAA
Downstream 100 bases:
>100_bases GATAAAAATAATAGGGCTTTTATCAAGAAATAACAATAAAACTTACAAACAATATGAAAAAATACTGTTTGTAAGTTTTA TGAAAAGTTATTTTGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MELVNIYDEYREVNKNYVDFIEELVNKNFEGFSEDFVMGNLENFQNSIGDLKVKADDLQVEEENKDNLKDLKYLIVDTLF LTFDLNNFYKLKEFERFKMRFANYVNKRRRDEMLKSF
Sequences:
>Translated_117_residues MELVNIYDEYREVNKNYVDFIEELVNKNFEGFSEDFVMGNLENFQNSIGDLKVKADDLQVEEENKDNLKDLKYLIVDTLF LTFDLNNFYKLKEFERFKMRFANYVNKRRRDEMLKSF >Mature_117_residues MELVNIYDEYREVNKNYVDFIEELVNKNFEGFSEDFVMGNLENFQNSIGDLKVKADDLQVEEENKDNLKDLKYLIVDTLF LTFDLNNFYKLKEFERFKMRFANYVNKRRRDEMLKSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14283; Mature: 14283
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELVNIYDEYREVNKNYVDFIEELVNKNFEGFSEDFVMGNLENFQNSIGDLKVKADDLQV CCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHCCEEECCCCCCC EEENKDNLKDLKYLIVDTLFLTFDLNNFYKLKEFERFKMRFANYVNKRRRDEMLKSF CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MELVNIYDEYREVNKNYVDFIEELVNKNFEGFSEDFVMGNLENFQNSIGDLKVKADDLQV CCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHCCEEECCCCCCC EEENKDNLKDLKYLIVDTLFLTFDLNNFYKLKEFERFKMRFANYVNKRRRDEMLKSF CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA