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The map label for this gene is ykgB [H]

Identifier: 18309956

GI number: 18309956

Start: 1173309

End: 1174328

Strand: Reverse

Name: ykgB [H]

Synonym: CPE0974

Alternate gene names: 18309956

Gene position: 1174328-1173309 (Counterclockwise)

Preceding gene: 18309959

Following gene: 18309955

Centisome position: 38.74

GC content: 27.65

Gene sequence:

>1020_bases
ATGAACAAATCTATTGCATATATAGGTACTTACACAAATGGGGCTAGTGAAGGTATCTATAGATTATGTCTAGATACTGA
TAAAGGAAATATTGATGATTTATCCGTAGTAGCTAGATTTGGTAATCCTACTTATTTGTGCATACATAACAATAAACTAT
ATACAGTGGGGAACCCACTTTCACTAGATACACTAGGTGGTGTTGCTTCTTATAATATAGAAGAGGATTATTCATTAAAA
TTAACAGGTGCTAGTTTACTTCAAGGTAAAAAACCTTGTCATATTAATATAATCCCTGATAAATCCTTAATAGTTTCAAG
TAATTATCATGAAAAATCAATTAATACTTATTCATTAAATGAGAATTTTGATATAGATACTTCATTAAGTGTATTTTCTC
ATAAAGATGACTCAAAAATGCATTTTGCATCAATAACTCCAGATAATAAATTTATATGTGCTGTAAATTTAGGTATGGAT
AGAATAGAACTTTTTAAAATAAATTCTAATAACACCTTAAGTTACATTGAAAATCTAAGTTTTTATTGTACTAAAGGATG
CGGTCCAAGACATATAGAATTTTCAAAGAATGGAAAGTTTGCATATGTTATATGTGAAAATAGTTCTGAAATCATTATAT
TAAAATATTTAGGAGAAGAAGGATTTAAATTAGTTCAGTATATTCATGTACTTCCTAATGGCTTTGGAGGACAAAATTTT
GGTTCTGCAATAAAAATAAGTCCTTGTAATAAATTCCTATACGTTTCTAACAGAGGCTTTAATGGAATATCAGCCTTTAG
AATAAATGAGGAAACTGGTTCTTTATCACTTATAAATCACTATAGTTCACATGGTGATTTCCCTAGGGATTTTGAAATCA
GTCCATGTAATAAGTTCTTAATCATTGCAAATGAAAAATCAGATAACCTAACAATTTATCTTAAAAATCCAGATGGAACA
CTAAAACTTTTTAAAAATGATATATTTATTCCATCTCCCACATGTATAAAGTTTAAATAG

Upstream 100 bases:

>100_bases
TTAATCTTTAATATTATTTATAAAAATTGTTAATATATCTTATATCATACAAATAAAACGTAAAATTAACAATATACTCA
AGTCAGAGGGGGCTTTAAAA

Downstream 100 bases:

>100_bases
CAAAATAATGGGCTGTATGAAAATATATAAATAAAACTTACAAGTATTATAAAGATAATGTCTACGAAAATATATTTGTA
AGTTTTATTAAAAATTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MNKSIAYIGTYTNGASEGIYRLCLDTDKGNIDDLSVVARFGNPTYLCIHNNKLYTVGNPLSLDTLGGVASYNIEEDYSLK
LTGASLLQGKKPCHINIIPDKSLIVSSNYHEKSINTYSLNENFDIDTSLSVFSHKDDSKMHFASITPDNKFICAVNLGMD
RIELFKINSNNTLSYIENLSFYCTKGCGPRHIEFSKNGKFAYVICENSSEIIILKYLGEEGFKLVQYIHVLPNGFGGQNF
GSAIKISPCNKFLYVSNRGFNGISAFRINEETGSLSLINHYSSHGDFPRDFEISPCNKFLIIANEKSDNLTIYLKNPDGT
LKLFKNDIFIPSPTCIKFK

Sequences:

>Translated_339_residues
MNKSIAYIGTYTNGASEGIYRLCLDTDKGNIDDLSVVARFGNPTYLCIHNNKLYTVGNPLSLDTLGGVASYNIEEDYSLK
LTGASLLQGKKPCHINIIPDKSLIVSSNYHEKSINTYSLNENFDIDTSLSVFSHKDDSKMHFASITPDNKFICAVNLGMD
RIELFKINSNNTLSYIENLSFYCTKGCGPRHIEFSKNGKFAYVICENSSEIIILKYLGEEGFKLVQYIHVLPNGFGGQNF
GSAIKISPCNKFLYVSNRGFNGISAFRINEETGSLSLINHYSSHGDFPRDFEISPCNKFLIIANEKSDNLTIYLKNPDGT
LKLFKNDIFIPSPTCIKFK
>Mature_339_residues
MNKSIAYIGTYTNGASEGIYRLCLDTDKGNIDDLSVVARFGNPTYLCIHNNKLYTVGNPLSLDTLGGVASYNIEEDYSLK
LTGASLLQGKKPCHINIIPDKSLIVSSNYHEKSINTYSLNENFDIDTSLSVFSHKDDSKMHFASITPDNKFICAVNLGMD
RIELFKINSNNTLSYIENLSFYCTKGCGPRHIEFSKNGKFAYVICENSSEIIILKYLGEEGFKLVQYIHVLPNGFGGQNF
GSAIKISPCNKFLYVSNRGFNGISAFRINEETGSLSLINHYSSHGDFPRDFEISPCNKFLIIANEKSDNLTIYLKNPDGT
LKLFKNDIFIPSPTCIKFK

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=248, Percent_Identity=26.2096774193548, Blast_Score=95, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 37863; Mature: 37863

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSIAYIGTYTNGASEGIYRLCLDTDKGNIDDLSVVARFGNPTYLCIHNNKLYTVGNPL
CCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCEEEECCCCC
SLDTLGGVASYNIEEDYSLKLTGASLLQGKKPCHINIIPDKSLIVSSNYHEKSINTYSLN
EECCCCCEEEECCCCCEEEEEECHHHHCCCCCEEEEEECCCCEEEECCCCCCCCEEEECC
ENFDIDTSLSVFSHKDDSKMHFASITPDNKFICAVNLGMDRIELFKINSNNTLSYIENLS
CCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCEEEHHHCCE
FYCTKGCGPRHIEFSKNGKFAYVICENSSEIIILKYLGEEGFKLVQYIHVLPNGFGGQNF
EEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCC
GSAIKISPCNKFLYVSNRGFNGISAFRINEETGSLSLINHYSSHGDFPRDFEISPCNKFL
CCEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEEHHHCCCCCCCEEECCCCEEE
IIANEKSDNLTIYLKNPDGTLKLFKNDIFIPSPTCIKFK
EEEECCCCCEEEEEECCCCEEEEEECCEECCCCCEEEEC
>Mature Secondary Structure
MNKSIAYIGTYTNGASEGIYRLCLDTDKGNIDDLSVVARFGNPTYLCIHNNKLYTVGNPL
CCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCEEEECCCCC
SLDTLGGVASYNIEEDYSLKLTGASLLQGKKPCHINIIPDKSLIVSSNYHEKSINTYSLN
EECCCCCEEEECCCCCEEEEEECHHHHCCCCCEEEEEECCCCEEEECCCCCCCCEEEECC
ENFDIDTSLSVFSHKDDSKMHFASITPDNKFICAVNLGMDRIELFKINSNNTLSYIENLS
CCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCEEEHHHCCE
FYCTKGCGPRHIEFSKNGKFAYVICENSSEIIILKYLGEEGFKLVQYIHVLPNGFGGQNF
EEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCC
GSAIKISPCNKFLYVSNRGFNGISAFRINEETGSLSLINHYSSHGDFPRDFEISPCNKFL
CCEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEEHHHCCCCCCCEEECCCCEEE
IIANEKSDNLTIYLKNPDGTLKLFKNDIFIPSPTCIKFK
EEEECCCCCEEEEEECCCCEEEEEECCEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]