Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309955

Identifier: 18309955

GI number: 18309955

Start: 1172822

End: 1172992

Strand: Reverse

Name: 18309955

Synonym: CPE0973

Alternate gene names: NA

Gene position: 1172992-1172822 (Counterclockwise)

Preceding gene: 18309956

Following gene: 18309953

Centisome position: 38.69

GC content: 28.07

Gene sequence:

>171_bases
GTGGATAATAATAAAAACAGGTTAAAAGATAGACCTAAATCAAATGCTGAGAAAAGAAAAATGTATTCAGAAGCTGGTTC
TGAAATAGGAATTGAAAATGGTCATAAAAAAGGCTCCCATTCAAATGGTAAAAAATATACTAAAAGATCAAAACTTTCTC
ACAATAAATAG

Upstream 100 bases:

>100_bases
TGATTTTTAAACCATAATTAAGCTCTGCTTTAATGGCATTTTAATTTAAAGGTCAATATTAAATAAAAAATATAGCTAAA
TATTAAGGAGGTAATAAAAG

Downstream 100 bases:

>100_bases
GAGGCCAAATCATGAGTAAAAACTGTAAGAAACATAAAACTGATTCCATCTCACCATGTTCAAATAATTATAATGAAAAA
GTTAAAAATAAAGCTAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MDNNKNRLKDRPKSNAEKRKMYSEAGSEIGIENGHKKGSHSNGKKYTKRSKLSHNK

Sequences:

>Translated_56_residues
MDNNKNRLKDRPKSNAEKRKMYSEAGSEIGIENGHKKGSHSNGKKYTKRSKLSHNK
>Mature_56_residues
MDNNKNRLKDRPKSNAEKRKMYSEAGSEIGIENGHKKGSHSNGKKYTKRSKLSHNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6414; Mature: 6414

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNKNRLKDRPKSNAEKRKMYSEAGSEIGIENGHKKGSHSNGKKYTKRSKLSHNK
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MDNNKNRLKDRPKSNAEKRKMYSEAGSEIGIENGHKKGSHSNGKKYTKRSKLSHNK
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA