| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is sstT [H]
Identifier: 18309949
GI number: 18309949
Start: 1164789
End: 1165952
Strand: Direct
Name: sstT [H]
Synonym: CPE0967
Alternate gene names: 18309949
Gene position: 1164789-1165952 (Clockwise)
Preceding gene: 18309948
Following gene: 18309950
Centisome position: 38.42
GC content: 30.67
Gene sequence:
>1164_bases GTGAAGAAATTATTTAATAATCTTATTTTTAAACTTGTTTTAGGTGTTATATTAGGAATAATAATAGGCACATACTCTTC AGAGGGGCTTATGTCAACAATTGTGACAATTAAGTATGTATTGGGACAAATTATATTTTTCTCTGTTCCACTTATTATTT TAGGATTTATAGCTCCATCTATTGCTAAATTAAAAGATAACGCAAGCAAACTATTAGGATATGCTGTTTTAATAGCTTAT TTATCTTCAGTTTTTGCTGCTATTCTTTCAATGATTGCAGGATATGCATTAATACCTAAATTATCTATAGTATCTAATAT AGCATCATTAAAGGAATTACCAGAACTTATATTTAAATTAGATATACCACCAGTTATGAGTGTAATGAGTGCGTTAGCTT TAGCATTACTTTTAGGATTAGCTGTTGGATGGACAAAGGCTGATTTAGTAGAAAAGCTTTTAGATCAATTTCAAGCTATA GTACTTAGTATTGTAAATAAAATAATAATACCAATATTACCATTTTTCATAGCAACTAACTTTGCAGCTTTAGCGTATGA AGGAGGATTAAGTAATCAACTTCCTGTATTCTTTAAAGTTATATTAATTGTATTATTTGGTCATTTTATATGGTTAACAA TTTTATATTTAATAGGTGGAGCAATATCAAAAGAAAATCCATGGGAAGTTGTAAAATACTATGGACCAGCGTATCTTACT GCTGTTGGTACAATGTCAAGTGCAGCAACATTACCAGTAGCTTTAGAGTCTGCAAAGAAATCAAAGGCTTTAAGAGAAGA TATAGTGGATTTTGCAATACCATTATGTTCAAACATACATTTATGTGGTTCAGTTCTTACAGAAGTATTTTTTGTAATGA CAGTATCTCAAATTTTATATGGTAAGATTCCTAGTTTACCAACTATGATATTGTTTATAGTATTATTAGGAGTATTCGCA ATAGGGGCACCAGGAGTCCCAGGTGGTACAGTAATGGCATCATTAGGTTTAATAATTAGTGTATTAGCCTTTGATGAGGC TGGGACAGCTCTTATGTTAACAATATTTGCTCTTCAAGATAGTTTTGGAACAGCATGTAATGTAACTGGGGATGGAGCAA TAGCTCTTATGCTGACAGGTATAGCAAAGAAAAAGAATTTATAA
Upstream 100 bases:
>100_bases CCGTGGAATTTTACTTCTGCCTCTGTATAGGGGGTAGAAGTTTTTTTATTTATAAATAATTCTTTACATGAAAGTATTAA ATAAAAAGGGGGGATAAATT
Downstream 100 bases:
>100_bases GACAAAAAGGTGTACTTTTATAGTACGCCTTTTTATTTTTAATTAAATAATAGGGAGTATACATGAAATTAAGGTGATAA AAATAATCACTTTAAATCAA
Product: glutamate/ aspartate transporter
Products: orotate [Cytoplasm]; fumarate [Cytoplasm]; malate [Cytoplasm]; Na (I) [Cytoplasm]; succinate [Cytoplasm] [C]
Alternate protein names: Na(+)/serine-threonine symporter [H]
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MKKLFNNLIFKLVLGVILGIIIGTYSSEGLMSTIVTIKYVLGQIIFFSVPLIILGFIAPSIAKLKDNASKLLGYAVLIAY LSSVFAAILSMIAGYALIPKLSIVSNIASLKELPELIFKLDIPPVMSVMSALALALLLGLAVGWTKADLVEKLLDQFQAI VLSIVNKIIIPILPFFIATNFAALAYEGGLSNQLPVFFKVILIVLFGHFIWLTILYLIGGAISKENPWEVVKYYGPAYLT AVGTMSSAATLPVALESAKKSKALREDIVDFAIPLCSNIHLCGSVLTEVFFVMTVSQILYGKIPSLPTMILFIVLLGVFA IGAPGVPGGTVMASLGLIISVLAFDEAGTALMLTIFALQDSFGTACNVTGDGAIALMLTGIAKKKNL
Sequences:
>Translated_387_residues MKKLFNNLIFKLVLGVILGIIIGTYSSEGLMSTIVTIKYVLGQIIFFSVPLIILGFIAPSIAKLKDNASKLLGYAVLIAY LSSVFAAILSMIAGYALIPKLSIVSNIASLKELPELIFKLDIPPVMSVMSALALALLLGLAVGWTKADLVEKLLDQFQAI VLSIVNKIIIPILPFFIATNFAALAYEGGLSNQLPVFFKVILIVLFGHFIWLTILYLIGGAISKENPWEVVKYYGPAYLT AVGTMSSAATLPVALESAKKSKALREDIVDFAIPLCSNIHLCGSVLTEVFFVMTVSQILYGKIPSLPTMILFIVLLGVFA IGAPGVPGGTVMASLGLIISVLAFDEAGTALMLTIFALQDSFGTACNVTGDGAIALMLTGIAKKKNL >Mature_387_residues MKKLFNNLIFKLVLGVILGIIIGTYSSEGLMSTIVTIKYVLGQIIFFSVPLIILGFIAPSIAKLKDNASKLLGYAVLIAY LSSVFAAILSMIAGYALIPKLSIVSNIASLKELPELIFKLDIPPVMSVMSALALALLLGLAVGWTKADLVEKLLDQFQAI VLSIVNKIIIPILPFFIATNFAALAYEGGLSNQLPVFFKVILIVLFGHFIWLTILYLIGGAISKENPWEVVKYYGPAYLT AVGTMSSAATLPVALESAKKSKALREDIVDFAIPLCSNIHLCGSVLTEVFFVMTVSQILYGKIPSLPTMILFIVLLGVFA IGAPGVPGGTVMASLGLIISVLAFDEAGTALMLTIFALQDSFGTACNVTGDGAIALMLTGIAKKKNL
Specific function: Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system) [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Caenorhabditis elegans, GI71996953, Length=273, Percent_Identity=25.2747252747253, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI193206505, Length=164, Percent_Identity=30.4878048780488, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR023025 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 41225; Mature: 41225
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFNNLIFKLVLGVILGIIIGTYSSEGLMSTIVTIKYVLGQIIFFSVPLIILGFIAPS CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAKLKDNASKLLGYAVLIAYLSSVFAAILSMIAGYALIPKLSIVSNIASLKELPELIFKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DIPPVMSVMSALALALLLGLAVGWTKADLVEKLLDQFQAIVLSIVNKIIIPILPFFIATN CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAALAYEGGLSNQLPVFFKVILIVLFGHFIWLTILYLIGGAISKENPWEVVKYYGPAYLT HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHH AVGTMSSAATLPVALESAKKSKALREDIVDFAIPLCSNIHLCGSVLTEVFFVMTVSQILY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GKIPSLPTMILFIVLLGVFAIGAPGVPGGTVMASLGLIISVLAFDEAGTALMLTIFALQD CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SFGTACNVTGDGAIALMLTGIAKKKNL CCCCEECCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLFNNLIFKLVLGVILGIIIGTYSSEGLMSTIVTIKYVLGQIIFFSVPLIILGFIAPS CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAKLKDNASKLLGYAVLIAYLSSVFAAILSMIAGYALIPKLSIVSNIASLKELPELIFKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DIPPVMSVMSALALALLLGLAVGWTKADLVEKLLDQFQAIVLSIVNKIIIPILPFFIATN CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAALAYEGGLSNQLPVFFKVILIVLFGHFIWLTILYLIGGAISKENPWEVVKYYGPAYLT HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHH AVGTMSSAATLPVALESAKKSKALREDIVDFAIPLCSNIHLCGSVLTEVFFVMTVSQILY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GKIPSLPTMILFIVLLGVFAIGAPGVPGGTVMASLGLIISVLAFDEAGTALMLTIFALQD CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SFGTACNVTGDGAIALMLTGIAKKKNL CCCCEECCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: orotate [Periplasm]; fumarate [Periplasm]; malate [Periplasm]; Na (I) [Periplasm]; succinate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + orotate [Periplasm] = Na (I) [Cytoplasm] + orotate [Cytoplasm] Na (I) [Periplasm] + fumarate [Periplasm] = Na (I) [Cytoplasm] + fumarate [Cytoplasm] Na (I) [Periplasm] + malate [Periplasm] = Na (I) [Cytoplasm] + malate [Cytoplasm] Na
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA