Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309950

Identifier: 18309950

GI number: 18309950

Start: 1166285

End: 1167280

Strand: Direct

Name: 18309950

Synonym: CPE0968

Alternate gene names: NA

Gene position: 1166285-1167280 (Clockwise)

Preceding gene: 18309949

Following gene: 18309951

Centisome position: 38.47

GC content: 21.29

Gene sequence:

>996_bases
ATGCGAAGCAGAGTTAATAAAATAAATAATCGTACAGTTGCTGCTTTAGGAATAAAAAGTTTAGATGAAAATTTAGAGAA
AAGTATAGTTAATATAATAAATTGTAATCCAGAATATATTATTTTAGGGTGTAGTGAAATTCCTTTTACAGAAAGAATTT
TGAAAGCTTTAAACAATGCTAATTGTCCTAAGATTTTAATACTTCCCTTTAACTATAGGTTTAGAAATCAAAGAGAGATA
GTTAATGAAATTAAATTTATGAAAAATTTCCCTGAAAATAATATAGCAATTATATTAAATTCAGTAAATGATTCTAATTT
TATCTTAACGGATAAAATTTGTTATATATCTTCAGGAAGTTTAAATAATAATGGTATAGCAAACAATGTAAATTCCTATG
AAATAATGAATGACAAAGATTGTAATTATAAATTATGGAAATCAGAAATCTTTGATTTTATAAATAAAGAAATAATAAAT
TACAGGAGTAATGATCAAAGGGAGCAAATAGAATACATTTTAAAGGAACTTAAAAAAAGGTTGTTTATCAATATTTCTAA
TAATTCCAATATATTAAATGAGGAGTATATATACATTCTTCTAGATATATTAAATAGCATAGATAGATTTATTATGATAG
GAACTGATGTTTATCAATATTTTGATAGGGATTTTTTAGACATAATAAAGAGTAATAAAAAAATATTAGCTAAAATAAAT
TCCATAAGAAATGAATTATTTAGAATACTTTTAAATATCAATGAAGGAAAGAATGATATTAATAACAAGATTTTTAATTG
CTTAAAAAATGAATTTTTAGTTCTTTTAGAAGAATTAGAGGAGTTAATAAATTTAAGAGAAAATAAATATCATAACTCTA
TTATGTCATGGAGAAAGGATGAAAGTATAAGCTCATTTTTATCAGCTAATAATACAATTAATAATTCTTTGATTAGGAAA
TTATATGAAAGAATTATTTTAAATTGTGAAAGATAA

Upstream 100 bases:

>100_bases
TTTAACTTTAAAACATGAAGATTAATATGAATTTGTTTATACTAGTTTTATATTTATGAAAGGAGGTAATTATCACCTTT
AAATAGGTTGATAAGTATTT

Downstream 100 bases:

>100_bases
GGAGTAGTGATAAAAGTGAGTAATGTAAAGAATAAATTTGCACTAGGAAATTATACAAAGGGAGCGGTTAAGAGCTTTGA
AAAGAATATAGTTAGCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MRSRVNKINNRTVAALGIKSLDENLEKSIVNIINCNPEYIILGCSEIPFTERILKALNNANCPKILILPFNYRFRNQREI
VNEIKFMKNFPENNIAIILNSVNDSNFILTDKICYISSGSLNNNGIANNVNSYEIMNDKDCNYKLWKSEIFDFINKEIIN
YRSNDQREQIEYILKELKKRLFINISNNSNILNEEYIYILLDILNSIDRFIMIGTDVYQYFDRDFLDIIKSNKKILAKIN
SIRNELFRILLNINEGKNDINNKIFNCLKNEFLVLLEELEELINLRENKYHNSIMSWRKDESISSFLSANNTINNSLIRK
LYERIILNCER

Sequences:

>Translated_331_residues
MRSRVNKINNRTVAALGIKSLDENLEKSIVNIINCNPEYIILGCSEIPFTERILKALNNANCPKILILPFNYRFRNQREI
VNEIKFMKNFPENNIAIILNSVNDSNFILTDKICYISSGSLNNNGIANNVNSYEIMNDKDCNYKLWKSEIFDFINKEIIN
YRSNDQREQIEYILKELKKRLFINISNNSNILNEEYIYILLDILNSIDRFIMIGTDVYQYFDRDFLDIIKSNKKILAKIN
SIRNELFRILLNINEGKNDINNKIFNCLKNEFLVLLEELEELINLRENKYHNSIMSWRKDESISSFLSANNTINNSLIRK
LYERIILNCER
>Mature_331_residues
MRSRVNKINNRTVAALGIKSLDENLEKSIVNIINCNPEYIILGCSEIPFTERILKALNNANCPKILILPFNYRFRNQREI
VNEIKFMKNFPENNIAIILNSVNDSNFILTDKICYISSGSLNNNGIANNVNSYEIMNDKDCNYKLWKSEIFDFINKEIIN
YRSNDQREQIEYILKELKKRLFINISNNSNILNEEYIYILLDILNSIDRFIMIGTDVYQYFDRDFLDIIKSNKKILAKIN
SIRNELFRILLNINEGKNDINNKIFNCLKNEFLVLLEELEELINLRENKYHNSIMSWRKDESISSFLSANNTINNSLIRK
LYERIILNCER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39071; Mature: 39071

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRVNKINNRTVAALGIKSLDENLEKSIVNIINCNPEYIILGCSEIPFTERILKALNNA
CCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCC
NCPKILILPFNYRFRNQREIVNEIKFMKNFPENNIAIILNSVNDSNFILTDKICYISSGS
CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEEEEECCC
LNNNGIANNVNSYEIMNDKDCNYKLWKSEIFDFINKEIINYRSNDQREQIEYILKELKKR
CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LFINISNNSNILNEEYIYILLDILNSIDRFIMIGTDVYQYFDRDFLDIIKSNKKILAKIN
EEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHCCHHHHHHHH
SIRNELFRILLNINEGKNDINNKIFNCLKNEFLVLLEELEELINLRENKYHNSIMSWRKD
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ESISSFLSANNTINNSLIRKLYERIILNCER
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSRVNKINNRTVAALGIKSLDENLEKSIVNIINCNPEYIILGCSEIPFTERILKALNNA
CCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCC
NCPKILILPFNYRFRNQREIVNEIKFMKNFPENNIAIILNSVNDSNFILTDKICYISSGS
CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEEEEECCC
LNNNGIANNVNSYEIMNDKDCNYKLWKSEIFDFINKEIINYRSNDQREQIEYILKELKKR
CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LFINISNNSNILNEEYIYILLDILNSIDRFIMIGTDVYQYFDRDFLDIIKSNKKILAKIN
EEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHCCHHHHHHHH
SIRNELFRILLNINEGKNDINNKIFNCLKNEFLVLLEELEELINLRENKYHNSIMSWRKD
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ESISSFLSANNTINNSLIRKLYERIILNCER
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA