| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309944
Identifier: 18309944
GI number: 18309944
Start: 1158113
End: 1159072
Strand: Direct
Name: 18309944
Synonym: CPE0962
Alternate gene names: NA
Gene position: 1158113-1159072 (Clockwise)
Preceding gene: 18309943
Following gene: 18309946
Centisome position: 38.2
GC content: 26.35
Gene sequence:
>960_bases ATGAAATATAAAAGATATTTTATATCACTTGTACTTATTTTAGCTATGGTAAGTATTGCAGAAATTACAGGGGAAAGAGA GATAATATTTCCAGAGGTGGCCGCTTTAGTTGTTGGATCTTGGGTTTTAGAAAAGCAACCTTGGAAGGTTAGTAAATTAG GATTAGTATGTCTTATGACACTATGTTCTATAGTAGGGGTACTTATTGTAAGATATGTTAACTTAGGATTAACTATTGAA GTTTTAATAGGATTAGTTTTTACTGGGCTTATATTAAAGCTATCAAAAACAACTCTTGTGCCAATTATTTCAGCTTGTAT TTTACCTATTGTACTTAGAACTGAGACTTGGGTTTATCCAATATCAGTATTTATACTTACTATACTTATAGTTTCAATTA AGTATTTTATAGAAGATTATGGAGTAAGTGAAGAGGTAAGAGAAGAACTTAAAGAAGAAATTACTAAACTTGAAAGAAAT ACTTCACTTAGAAAAAAAGAATTTATTAGATTATTGAAGATATTTATTACTGTAGGTATATTAACATATTTTTCTGTTAA ATTTAATATTACTTTATTAATAGCACCACCTTTAATAGTTGCTTTTATAGAACTTACAAATGAACATTGTAAGTTTAGGC AGCGTTCAAAAAGTTTATTATTCTTGTTTATTGTTGTAGCTATTTTAGGATTTATATTTAGAATTGGATTTAACGAATAT TTAGGACTGCCTTTATGGCTTTGTACTATTTTTCTATTAATTAGTTTATTTATATGTCTTGAAATATTTAATATGTATTT TCCACCAGTTGCAGCAATTGCTGTTTTACCAATGCTATTAACTAGTAAACAAGTAATGTTTTATCCATTTCAAATTGCTA TAGGATGCCTTATATTTATAACTATTGCTATGATTTTTTTTAAAGAAGAAAAATGTATTGTTGACACTTTTAAGAATTAA
Upstream 100 bases:
>100_bases AATGTTTAAAAGTAGTATAGAGATAGTTGTCTTATTTTTAACAAAATACTTTTGGTATGATAAAATTAATCTGAAATTTT TAAACAAAGGATGTCATAAT
Downstream 100 bases:
>100_bases AATAAATTTATTGAAAAAATAATTGGCCATAGAAATTTATGACCAATTATTTTTTTAGGAATTTTTATTATTATAGTTAA CTTTAAAGTATAGTCCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKYKRYFISLVLILAMVSIAEITGEREIIFPEVAALVVGSWVLEKQPWKVSKLGLVCLMTLCSIVGVLIVRYVNLGLTIE VLIGLVFTGLILKLSKTTLVPIISACILPIVLRTETWVYPISVFILTILIVSIKYFIEDYGVSEEVREELKEEITKLERN TSLRKKEFIRLLKIFITVGILTYFSVKFNITLLIAPPLIVAFIELTNEHCKFRQRSKSLLFLFIVVAILGFIFRIGFNEY LGLPLWLCTIFLLISLFICLEIFNMYFPPVAAIAVLPMLLTSKQVMFYPFQIAIGCLIFITIAMIFFKEEKCIVDTFKN
Sequences:
>Translated_319_residues MKYKRYFISLVLILAMVSIAEITGEREIIFPEVAALVVGSWVLEKQPWKVSKLGLVCLMTLCSIVGVLIVRYVNLGLTIE VLIGLVFTGLILKLSKTTLVPIISACILPIVLRTETWVYPISVFILTILIVSIKYFIEDYGVSEEVREELKEEITKLERN TSLRKKEFIRLLKIFITVGILTYFSVKFNITLLIAPPLIVAFIELTNEHCKFRQRSKSLLFLFIVVAILGFIFRIGFNEY LGLPLWLCTIFLLISLFICLEIFNMYFPPVAAIAVLPMLLTSKQVMFYPFQIAIGCLIFITIAMIFFKEEKCIVDTFKN >Mature_319_residues MKYKRYFISLVLILAMVSIAEITGEREIIFPEVAALVVGSWVLEKQPWKVSKLGLVCLMTLCSIVGVLIVRYVNLGLTIE VLIGLVFTGLILKLSKTTLVPIISACILPIVLRTETWVYPISVFILTILIVSIKYFIEDYGVSEEVREELKEEITKLERN TSLRKKEFIRLLKIFITVGILTYFSVKFNITLLIAPPLIVAFIELTNEHCKFRQRSKSLLFLFIVVAILGFIFRIGFNEY LGLPLWLCTIFLLISLFICLEIFNMYFPPVAAIAVLPMLLTSKQVMFYPFQIAIGCLIFITIAMIFFKEEKCIVDTFKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36522; Mature: 36522
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKRYFISLVLILAMVSIAEITGEREIIFPEVAALVVGSWVLEKQPWKVSKLGLVCLMT CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LCSIVGVLIVRYVNLGLTIEVLIGLVFTGLILKLSKTTLVPIISACILPIVLRTETWVYP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ISVFILTILIVSIKYFIEDYGVSEEVREELKEEITKLERNTSLRKKEFIRLLKIFITVGI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LTYFSVKFNITLLIAPPLIVAFIELTNEHCKFRQRSKSLLFLFIVVAILGFIFRIGFNEY HHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH LGLPLWLCTIFLLISLFICLEIFNMYFPPVAAIAVLPMLLTSKQVMFYPFQIAIGCLIFI HCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH TIAMIFFKEEKCIVDTFKN HHHHHHHCCCHHHHCCCCC >Mature Secondary Structure MKYKRYFISLVLILAMVSIAEITGEREIIFPEVAALVVGSWVLEKQPWKVSKLGLVCLMT CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LCSIVGVLIVRYVNLGLTIEVLIGLVFTGLILKLSKTTLVPIISACILPIVLRTETWVYP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ISVFILTILIVSIKYFIEDYGVSEEVREELKEEITKLERNTSLRKKEFIRLLKIFITVGI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LTYFSVKFNITLLIAPPLIVAFIELTNEHCKFRQRSKSLLFLFIVVAILGFIFRIGFNEY HHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH LGLPLWLCTIFLLISLFICLEIFNMYFPPVAAIAVLPMLLTSKQVMFYPFQIAIGCLIFI HCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH TIAMIFFKEEKCIVDTFKN HHHHHHHCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA