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The map label for this gene is ohrR [H]

Identifier: 18309943

GI number: 18309943

Start: 1157357

End: 1157788

Strand: Direct

Name: ohrR [H]

Synonym: CPE0961

Alternate gene names: 18309943

Gene position: 1157357-1157788 (Clockwise)

Preceding gene: 18309942

Following gene: 18309944

Centisome position: 38.18

GC content: 24.31

Gene sequence:

>432_bases
ATGGATAAATATAATATTTTAAAGTTAGAAAATCAACTTTGTTTTAGATTATATGCTTCTTCAAGAGAAGTTTTAAAAAA
ATATAAACCTATTTTAGATCAATATAATTTAACTTATACACAATATTTAACAATGCTTGTTTTGTGGGAAAATGAAAAAA
TAACAGTTAAAGGGATTGGTGAAAAATTACATCTTGATTCTGGAACTTTAACACCTCTTATAAAAAAGTTAGAAAAAATG
AATCTTGTAACAAAATATAGATCAAAAGAGGATGACAGAGTTGTAATAGTTGAATTAACAGATGAGGGAAGAAATTTAAA
AGATGATATGATAGATGTGCCAAGAAAGGCGTTTTGTTCTTTAGGAATAGAAAAAGAGCAAATATTAGAACTTAAGAAAA
ATTTAGACTCATTACTAGAAATATTAAAGTAA

Upstream 100 bases:

>100_bases
TAATTTATATTGACAATATAATAAAAAAGTAATATCTTAATTTTATAATTAATTGTATAAAATTTAATGTAGCATATTTA
AAGGATTAAAGGGAGATATT

Downstream 100 bases:

>100_bases
AAAGCATGTATATAAGCATATATACATGCTTTTTTTATATTAAATAGGGATAAATTTACGTGTTATATAGTAAATTTTAT
TTTTTTAGTTAAGACAAAAG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MDKYNILKLENQLCFRLYASSREVLKKYKPILDQYNLTYTQYLTMLVLWENEKITVKGIGEKLHLDSGTLTPLIKKLEKM
NLVTKYRSKEDDRVVIVELTDEGRNLKDDMIDVPRKAFCSLGIEKEQILELKKNLDSLLEILK

Sequences:

>Translated_143_residues
MDKYNILKLENQLCFRLYASSREVLKKYKPILDQYNLTYTQYLTMLVLWENEKITVKGIGEKLHLDSGTLTPLIKKLEKM
NLVTKYRSKEDDRVVIVELTDEGRNLKDDMIDVPRKAFCSLGIEKEQILELKKNLDSLLEILK
>Mature_143_residues
MDKYNILKLENQLCFRLYASSREVLKKYKPILDQYNLTYTQYLTMLVLWENEKITVKGIGEKLHLDSGTLTPLIKKLEKM
NLVTKYRSKEDDRVVIVELTDEGRNLKDDMIDVPRKAFCSLGIEKEQILELKKNLDSLLEILK

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16826; Mature: 16826

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKYNILKLENQLCFRLYASSREVLKKYKPILDQYNLTYTQYLTMLVLWENEKITVKGIG
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCEEEEEECC
EKLHLDSGTLTPLIKKLEKMNLVTKYRSKEDDRVVIVELTDEGRNLKDDMIDVPRKAFCS
CEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHCCHHHHHH
LGIEKEQILELKKNLDSLLEILK
CCCCHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDKYNILKLENQLCFRLYASSREVLKKYKPILDQYNLTYTQYLTMLVLWENEKITVKGIG
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCEEEEEECC
EKLHLDSGTLTPLIKKLEKMNLVTKYRSKEDDRVVIVELTDEGRNLKDDMIDVPRKAFCS
CEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHCCHHHHHH
LGIEKEQILELKKNLDSLLEILK
CCCCHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]