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The map label for this gene is ydjN [C]

Identifier: 18309929

GI number: 18309929

Start: 1145169

End: 1146476

Strand: Direct

Name: ydjN [C]

Synonym: CPE0947

Alternate gene names: 18309929

Gene position: 1145169-1146476 (Clockwise)

Preceding gene: 18309926

Following gene: 18309930

Centisome position: 37.78

GC content: 29.89

Gene sequence:

>1308_bases
ATGATTAATATTAAATTAATATTAGCAATTGTGCTTTCAATATTAGCAACATATGCTATATATAAAATAAGAAAAATTAC
AAATAAATTTTCATTTGCTACGCTGACAGCATTAACTTTAGGGGTAGTACTTGGAATTATATTTAAGGAGAATATACTAT
TTTTAGATACAGTAGGAAAGGCTTATATGTCTTTAATTAAGATGATAGTAGTTCCTTTAGTAGTAACATCCTTAATAACT
AGTATTGTTAGATTAGAAAATTTAGATACATTAAAATCAATAGGATTAAAAACATTTACTGTTTTATTAGGAACTACAGG
AGCTGCAGCCTTTATAGGAATTATTGTATCTAGTTCTTTAAATCTTGGACAAGGTTTAAGCTTTATAGGGGCTGAAAATT
TTAAGGCAAGAGAAATACCAGGGTTTTCTAAGGTACTTATAGATATGCTACCATCAAATCCTTTAGCAGCTATTGTAGAA
AATAAAATAATACCAATAGTTATCTTTTCAATGTTTATAGCAATTGCGTTAGTTATTGAAGATAATACTAATAAAGAAAA
AGCAAAGCCATTTAAAGATTTTATTTTATCAGCTTATGATATAGTTTTAAGAATAACTAAAATGGTATTAAGAATAATAC
CATATGGAGTATTTGCCTTAATAGCTACAGCGGCAGCTAAAAATGGAATGGATACTTTGATGTCATTAATATGGGTTATA
CTAGCTGTTTATATAGCTGCTTTTCTTCAATTTTTATTTGTATATACGCCATTAATAAGCTTTGTTGCAAGGATGAATCC
ATTAAAATTCTTTAAAGGAATTTTCCCAGCGCAGGTTGTAGCTTTTACAAGCCAAAGTAGTTATGGTACTTTACCTGTTA
CAATAAAATCTTTAGTAGAAGGTGTAGGAGTATCAGAAAATATAGCAAGCTTTGTAGCACCACTTGGGTCAACAATTGGA
TTAAATGGATGTGGAGGTTTTTATCCAGCAATAGTTGCAATATTTGCAGCCAATGTTTTTAATGTAGAACTTACTATTTA
TTCATATATACTTATAGTTTTAACTGCTATAATATCTTCTATAGGAATAGCAGGGGTACCTGGATCAGCAACAATGTCAA
CAACTGTAATGTTAGCGGCCTTAGGGTTACCAATAGAAGCACTAGCAATGGTAATCGCAGTGGATTCTATAATTGATATG
ATAAGAACTGCTACAAATGTAACAGGGGCCTCAGTTGCTGCATTAATAGTTGATCAAACAGAAAAAAGAAAAGAATATAA
AGTTGAAGAATCAGTACAAAGAGCATAA

Upstream 100 bases:

>100_bases
GCCAGCATATAAAAATAAAATTATACTTTGTAAGCTTGGCTTTTAATATAAAAGCTTAGCAATATTAAATAAAAAGTAAT
TTTATAGGAGGAAATTTTTT

Downstream 100 bases:

>100_bases
AATTAAAACTTTATTTTAAAATATAATACATAAATATCTAATGCAAGGAGTTGAATTAAAGACTTAATAAAGCTTGTTTA
TTAATAAGTTTTAAACTAAA

Product: transmembrane symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MINIKLILAIVLSILATYAIYKIRKITNKFSFATLTALTLGVVLGIIFKENILFLDTVGKAYMSLIKMIVVPLVVTSLIT
SIVRLENLDTLKSIGLKTFTVLLGTTGAAAFIGIIVSSSLNLGQGLSFIGAENFKAREIPGFSKVLIDMLPSNPLAAIVE
NKIIPIVIFSMFIAIALVIEDNTNKEKAKPFKDFILSAYDIVLRITKMVLRIIPYGVFALIATAAAKNGMDTLMSLIWVI
LAVYIAAFLQFLFVYTPLISFVARMNPLKFFKGIFPAQVVAFTSQSSYGTLPVTIKSLVEGVGVSENIASFVAPLGSTIG
LNGCGGFYPAIVAIFAANVFNVELTIYSYILIVLTAIISSIGIAGVPGSATMSTTVMLAALGLPIEALAMVIAVDSIIDM
IRTATNVTGASVAALIVDQTEKRKEYKVEESVQRA

Sequences:

>Translated_435_residues
MINIKLILAIVLSILATYAIYKIRKITNKFSFATLTALTLGVVLGIIFKENILFLDTVGKAYMSLIKMIVVPLVVTSLIT
SIVRLENLDTLKSIGLKTFTVLLGTTGAAAFIGIIVSSSLNLGQGLSFIGAENFKAREIPGFSKVLIDMLPSNPLAAIVE
NKIIPIVIFSMFIAIALVIEDNTNKEKAKPFKDFILSAYDIVLRITKMVLRIIPYGVFALIATAAAKNGMDTLMSLIWVI
LAVYIAAFLQFLFVYTPLISFVARMNPLKFFKGIFPAQVVAFTSQSSYGTLPVTIKSLVEGVGVSENIASFVAPLGSTIG
LNGCGGFYPAIVAIFAANVFNVELTIYSYILIVLTAIISSIGIAGVPGSATMSTTVMLAALGLPIEALAMVIAVDSIIDM
IRTATNVTGASVAALIVDQTEKRKEYKVEESVQRA
>Mature_435_residues
MINIKLILAIVLSILATYAIYKIRKITNKFSFATLTALTLGVVLGIIFKENILFLDTVGKAYMSLIKMIVVPLVVTSLIT
SIVRLENLDTLKSIGLKTFTVLLGTTGAAAFIGIIVSSSLNLGQGLSFIGAENFKAREIPGFSKVLIDMLPSNPLAAIVE
NKIIPIVIFSMFIAIALVIEDNTNKEKAKPFKDFILSAYDIVLRITKMVLRIIPYGVFALIATAAAKNGMDTLMSLIWVI
LAVYIAAFLQFLFVYTPLISFVARMNPLKFFKGIFPAQVVAFTSQSSYGTLPVTIKSLVEGVGVSENIASFVAPLGSTIG
LNGCGGFYPAIVAIFAANVFNVELTIYSYILIVLTAIISSIGIAGVPGSATMSTTVMLAALGLPIEALAMVIAVDSIIDM
IRTATNVTGASVAALIVDQTEKRKEYKVEESVQRA

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI169790839, Length=468, Percent_Identity=27.7777777777778, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI4827012, Length=271, Percent_Identity=33.9483394833948, Blast_Score=142, Evalue=4e-34,
Organism=Homo sapiens, GI40254478, Length=484, Percent_Identity=26.2396694214876, Blast_Score=139, Evalue=7e-33,
Organism=Homo sapiens, GI66773030, Length=253, Percent_Identity=33.201581027668, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI194239697, Length=277, Percent_Identity=31.7689530685921, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI21314632, Length=444, Percent_Identity=25, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI223468564, Length=172, Percent_Identity=34.3023255813954, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI223468566, Length=172, Percent_Identity=34.3023255813954, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI5032093, Length=190, Percent_Identity=33.1578947368421, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI301601644, Length=165, Percent_Identity=32.1212121212121, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI262359914, Length=468, Percent_Identity=24.3589743589744, Blast_Score=92, Evalue=6e-19,
Organism=Escherichia coli, GI1788024, Length=468, Percent_Identity=30.1282051282051, Blast_Score=182, Evalue=4e-47,
Organism=Escherichia coli, GI1790514, Length=430, Percent_Identity=30.4651162790698, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI1789947, Length=413, Percent_Identity=25.181598062954, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1789473, Length=289, Percent_Identity=23.5294117647059, Blast_Score=65, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193206505, Length=455, Percent_Identity=27.4725274725275, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI71983106, Length=459, Percent_Identity=26.5795206971678, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI71983099, Length=459, Percent_Identity=26.5795206971678, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI71996953, Length=454, Percent_Identity=26.8722466960352, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17541374, Length=423, Percent_Identity=25.7683215130024, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17537407, Length=471, Percent_Identity=26.3269639065817, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI193206654, Length=457, Percent_Identity=26.2582056892779, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24583025, Length=452, Percent_Identity=24.5575221238938, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI17137668, Length=452, Percent_Identity=24.5575221238938, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24583023, Length=452, Percent_Identity=24.5575221238938, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI281360481, Length=242, Percent_Identity=29.7520661157025, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI281360483, Length=242, Percent_Identity=29.7520661157025, Blast_Score=89, Evalue=8e-18,
Organism=Drosophila melanogaster, GI17137666, Length=242, Percent_Identity=29.7520661157025, Blast_Score=89, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 46633; Mature: 46633

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIKLILAIVLSILATYAIYKIRKITNKFSFATLTALTLGVVLGIIFKENILFLDTVGK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHH
AYMSLIKMIVVPLVVTSLITSIVRLENLDTLKSIGLKTFTVLLGTTGAAAFIGIIVSSSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCC
NLGQGLSFIGAENFKAREIPGFSKVLIDMLPSNPLAAIVENKIIPIVIFSMFIAIALVIE
CCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCC
DNTNKEKAKPFKDFILSAYDIVLRITKMVLRIIPYGVFALIATAAAKNGMDTLMSLIWVI
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LAVYIAAFLQFLFVYTPLISFVARMNPLKFFKGIFPAQVVAFTSQSSYGTLPVTIKSLVE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHEECCCCCCCCHHHHHHHHC
GVGVSENIASFVAPLGSTIGLNGCGGFYPAIVAIFAANVFNVELTIYSYILIVLTAIISS
CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHH
IGIAGVPGSATMSTTVMLAALGLPIEALAMVIAVDSIIDMIRTATNVTGASVAALIVDQT
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCH
EKRKEYKVEESVQRA
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MINIKLILAIVLSILATYAIYKIRKITNKFSFATLTALTLGVVLGIIFKENILFLDTVGK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHH
AYMSLIKMIVVPLVVTSLITSIVRLENLDTLKSIGLKTFTVLLGTTGAAAFIGIIVSSSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCC
NLGQGLSFIGAENFKAREIPGFSKVLIDMLPSNPLAAIVENKIIPIVIFSMFIAIALVIE
CCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCC
DNTNKEKAKPFKDFILSAYDIVLRITKMVLRIIPYGVFALIATAAAKNGMDTLMSLIWVI
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LAVYIAAFLQFLFVYTPLISFVARMNPLKFFKGIFPAQVVAFTSQSSYGTLPVTIKSLVE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHEECCCCCCCCHHHHHHHHC
GVGVSENIASFVAPLGSTIGLNGCGGFYPAIVAIFAANVFNVELTIYSYILIVLTAIISS
CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHH
IGIAGVPGSATMSTTVMLAALGLPIEALAMVIAVDSIIDMIRTATNVTGASVAALIVDQT
CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCH
EKRKEYKVEESVQRA
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]