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The map label for this gene is ycbL [H]

Identifier: 18309930

GI number: 18309930

Start: 1146821

End: 1147510

Strand: Direct

Name: ycbL [H]

Synonym: CPE0948

Alternate gene names: 18309930

Gene position: 1146821-1147510 (Clockwise)

Preceding gene: 18309929

Following gene: 18309931

Centisome position: 37.83

GC content: 27.1

Gene sequence:

>690_bases
ATGATTAATTCAGAAAGTATTTTAATAGTTGAAGATGATATAGATATAAATAATTTATTGAGTAAAATTTTAGAAAAGGA
AGGGTTTAAAGTTAGACAAGCATTTTCAGGATCTGAAGGTAAGATGTGTTTAGAATTTTTTGATTTTGATATGGTACTTT
TAGATCTTATGCTACCGGGTATAACTGGTGAAATATTTATAGAGGAGATTAGAAAGATAAAGAACACTCCAATAATAGTT
ATATCAGCAAAAACTGCAATGGAGGATAAGATAAATGTTTTAAAATTAGGTGCTGATGATTTTATAAGCAAACCTTTTGA
TGTTAATGAAGTTTTAGCTAGGGTTGAAGCGCTTTTAAGAAGAAGTAAAATAACAAATTCAAGTAAAGGTGTAGAGACAA
TAAAATATAAGAACCTTATATTAGAACCTAGAAGTAGAGAAGTTAAGGTTAAGGGAGAGGAAATACAACTTACTTCTAAA
GAGTTTAAAATATTAGAACTTTTAGTTTGTAATCCAAAGAAAGTTTTTACTAAGGCAAATTTATTTGAAACAGTATGGGA
AGAGGAGTTTTTAGGTGATGATAATACTATAAATGTTCACATAAGCAATCTTAGAAATAAGATAAATCTTTTAGATAATG
AAAATGATTATATAAAAACTATTTGGGGAGTAGGCTTTAAAATGGATTAG

Upstream 100 bases:

>100_bases
GATTATTTTAAATAAATCTAACTGTAGTATTATGGTATTATTTTGGTATAGAAAGTTTTAAAAATACAATTATAAATTAA
TTTTTAGAGGAGTTATAATT

Downstream 100 bases:

>100_bases
CTACATTGATGATTCATAATTTCTTTAATAAGTTGATTTGAATAAATATCAAAATATAGAGGAGTTTATATTTTAAATAT
ACATTTAATTAAGGTTTAAT

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MINSESILIVEDDIDINNLLSKILEKEGFKVRQAFSGSEGKMCLEFFDFDMVLLDLMLPGITGEIFIEEIRKIKNTPIIV
ISAKTAMEDKINVLKLGADDFISKPFDVNEVLARVEALLRRSKITNSSKGVETIKYKNLILEPRSREVKVKGEEIQLTSK
EFKILELLVCNPKKVFTKANLFETVWEEEFLGDDNTINVHISNLRNKINLLDNENDYIKTIWGVGFKMD

Sequences:

>Translated_229_residues
MINSESILIVEDDIDINNLLSKILEKEGFKVRQAFSGSEGKMCLEFFDFDMVLLDLMLPGITGEIFIEEIRKIKNTPIIV
ISAKTAMEDKINVLKLGADDFISKPFDVNEVLARVEALLRRSKITNSSKGVETIKYKNLILEPRSREVKVKGEEIQLTSK
EFKILELLVCNPKKVFTKANLFETVWEEEFLGDDNTINVHISNLRNKINLLDNENDYIKTIWGVGFKMD
>Mature_229_residues
MINSESILIVEDDIDINNLLSKILEKEGFKVRQAFSGSEGKMCLEFFDFDMVLLDLMLPGITGEIFIEEIRKIKNTPIIV
ISAKTAMEDKINVLKLGADDFISKPFDVNEVLARVEALLRRSKITNSSKGVETIKYKNLILEPRSREVKVKGEEIQLTSK
EFKILELLVCNPKKVFTKANLFETVWEEEFLGDDNTINVHISNLRNKINLLDNENDYIKTIWGVGFKMD

Specific function: Member of the two-component regulatory system ycbM/ycbL [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=225, Percent_Identity=35.5555555555556, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=33.7777777777778, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1789809, Length=226, Percent_Identity=34.5132743362832, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=31.140350877193, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=35.5555555555556, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=33.1858407079646, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=31.6742081447964, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=30.7359307359307, Blast_Score=120, Evalue=6e-29,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=31.3636363636364, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1790552, Length=223, Percent_Identity=33.1838565022422, Blast_Score=117, Evalue=5e-28,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=32.1266968325792, Blast_Score=110, Evalue=6e-26,
Organism=Escherichia coli, GI1790860, Length=234, Percent_Identity=29.0598290598291, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=26.1061946902655, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=27.7056277056277, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=31.1320754716981, Blast_Score=63, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=112, Percent_Identity=33.9285714285714, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26219; Mature: 26219

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINSESILIVEDDIDINNLLSKILEKEGFKVRQAFSGSEGKMCLEFFDFDMVLLDLMLPG
CCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEHHCCCCCCCEEEEHHHHHHHHHHHHCCC
ITGEIFIEEIRKIKNTPIIVISAKTAMEDKINVLKLGADDFISKPFDVNEVLARVEALLR
CCHHHHHHHHHHHCCCCEEEEECCCCHHCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHH
RSKITNSSKGVETIKYKNLILEPRSREVKVKGEEIQLTSKEFKILELLVCNPKKVFTKAN
HHHCCCCCCCCEEEEEEHEEECCCCCEEEEECCEEEEEHHHHEEEEEEECCCHHHHHHHH
LFETVWEEEFLGDDNTINVHISNLRNKINLLDNENDYIKTIWGVGFKMD
HHHHHHHHHHCCCCCEEEEEEHHCCCCEEECCCCCCEEEHEECCCEECC
>Mature Secondary Structure
MINSESILIVEDDIDINNLLSKILEKEGFKVRQAFSGSEGKMCLEFFDFDMVLLDLMLPG
CCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEHHCCCCCCCEEEEHHHHHHHHHHHHCCC
ITGEIFIEEIRKIKNTPIIVISAKTAMEDKINVLKLGADDFISKPFDVNEVLARVEALLR
CCHHHHHHHHHHHCCCCEEEEECCCCHHCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHH
RSKITNSSKGVETIKYKNLILEPRSREVKVKGEEIQLTSKEFKILELLVCNPKKVFTKAN
HHHCCCCCCCCEEEEEEHEEECCCCCEEEEECCEEEEEHHHHEEEEEEECCCHHHHHHHH
LFETVWEEEFLGDDNTINVHISNLRNKINLLDNENDYIKTIWGVGFKMD
HHHHHHHHHHCCCCCEEEEEEHHCCCCEEECCCCCCEEEHEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377 [H]