| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309888
Identifier: 18309888
GI number: 18309888
Start: 1107716
End: 1108474
Strand: Direct
Name: 18309888
Synonym: CPE0906
Alternate gene names: NA
Gene position: 1107716-1108474 (Clockwise)
Preceding gene: 18309887
Following gene: 18309889
Centisome position: 36.54
GC content: 29.64
Gene sequence:
>759_bases ATGAAAGGGGGTAAGGATAATATGGACTATGAAAAGTTAGTTGAATTCTTAGTAGATGAAATATACAAAAGAATTCAAGA GGAAAATAATAAAAGCAATTCTTTAGAAAAGAGAAAATCCATTGTTGTAATTGGAGAGAGTAATGTAAGTTTCTACAGAG AAGCCTTAAAAGGATTTGATATTAATCCATTAACATCAGAATGCAAAGATTGCGACATACTACTTATATCAAAGCTTTGC ATTAAGGGACTTAGCAACATAGCTCAAGGAACATGTACAACAAAGGCAGAAAATTTTGCTTTAGAAATGCTTTTAAAAGG TAAGAAAGTTTATATTCTTGAGGATGGTATTGAGTATAGAAAATACAAAAATACGGCTCCAAAAGTTTTATACAATAAAT ATATTAAGTTTGAGGAAGAGCTTCTAGCCTATGGCATAGAGGTTATAGATGATTTAAATAGGATTTCAATAGAAAGCAAG GATGAAAAAGTTTCTCTTAGTGGAATTAAAGAAGAAATAAGTAAGAATCTTTGTTTATGCAGTGAAAATAAGGTTGAAGG AAAAAAGGACTTAGACACTACTGCTATTGCAGATGAGTTCACAATAAATCTTTCAAATAAGAAATTAGTATCAGAAAGTG ATCTAAGAAAGCCTCACATAAATGGAGTAAGAACCTTAATAGTTGATAAAAAAGCTATAATTACTCCCTTAGCAAAGGAT TATATTCGCATAAATAATTTAAATGTTGTGCTTTCTTAG
Upstream 100 bases:
>100_bases TATATTAAGCTTTTGTAAAGGATTATATAGTTTAACTACATAAAATCTTATAAGCATTTAAATAAGATTTTAGCTAATGT AAATAAGAGTAAGCCTCTAA
Downstream 100 bases:
>100_bases AGTAGCTTAACTCTTTAAAATATGGATGATTTTTGTTTATGAAGCTAATTAAACTTAAGAATCATCCATATTTAAAATAA ACAACCTTTAAAAAAGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Ethanolamine Utilization Protein
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKGGKDNMDYEKLVEFLVDEIYKRIQEENNKSNSLEKRKSIVVIGESNVSFYREALKGFDINPLTSECKDCDILLISKLC IKGLSNIAQGTCTTKAENFALEMLLKGKKVYILEDGIEYRKYKNTAPKVLYNKYIKFEEELLAYGIEVIDDLNRISIESK DEKVSLSGIKEEISKNLCLCSENKVEGKKDLDTTAIADEFTINLSNKKLVSESDLRKPHINGVRTLIVDKKAIITPLAKD YIRINNLNVVLS
Sequences:
>Translated_252_residues MKGGKDNMDYEKLVEFLVDEIYKRIQEENNKSNSLEKRKSIVVIGESNVSFYREALKGFDINPLTSECKDCDILLISKLC IKGLSNIAQGTCTTKAENFALEMLLKGKKVYILEDGIEYRKYKNTAPKVLYNKYIKFEEELLAYGIEVIDDLNRISIESK DEKVSLSGIKEEISKNLCLCSENKVEGKKDLDTTAIADEFTINLSNKKLVSESDLRKPHINGVRTLIVDKKAIITPLAKD YIRINNLNVVLS >Mature_252_residues MKGGKDNMDYEKLVEFLVDEIYKRIQEENNKSNSLEKRKSIVVIGESNVSFYREALKGFDINPLTSECKDCDILLISKLC IKGLSNIAQGTCTTKAENFALEMLLKGKKVYILEDGIEYRKYKNTAPKVLYNKYIKFEEELLAYGIEVIDDLNRISIESK DEKVSLSGIKEEISKNLCLCSENKVEGKKDLDTTAIADEFTINLSNKKLVSESDLRKPHINGVRTLIVDKKAIITPLAKD YIRINNLNVVLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28615; Mature: 28615
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGGKDNMDYEKLVEFLVDEIYKRIQEENNKSNSLEKRKSIVVIGESNVSFYREALKGFD CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEECCCHHHHHHHHHCCC INPLTSECKDCDILLISKLCIKGLSNIAQGTCTTKAENFALEMLLKGKKVYILEDGIEYR CCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHH KYKNTAPKVLYNKYIKFEEELLAYGIEVIDDLNRISIESKDEKVSLSGIKEEISKNLCLC HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCEEE SENKVEGKKDLDTTAIADEFTINLSNKKLVSESDLRKPHINGVRTLIVDKKAIITPLAKD CCCCCCCCCCCCHHHCCCEEEEEECCCEECCHHHCCCCCCCCCEEEEECCHHHHHHHHHH YIRINNLNVVLS HEEECCEEEEEC >Mature Secondary Structure MKGGKDNMDYEKLVEFLVDEIYKRIQEENNKSNSLEKRKSIVVIGESNVSFYREALKGFD CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEECCCHHHHHHHHHCCC INPLTSECKDCDILLISKLCIKGLSNIAQGTCTTKAENFALEMLLKGKKVYILEDGIEYR CCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHH KYKNTAPKVLYNKYIKFEEELLAYGIEVIDDLNRISIESKDEKVSLSGIKEEISKNLCLC HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCEEE SENKVEGKKDLDTTAIADEFTINLSNKKLVSESDLRKPHINGVRTLIVDKKAIITPLAKD CCCCCCCCCCCCHHHCCCEEEEEECCCEECCHHHCCCCCCCCCEEEEECCHHHHHHHHHH YIRINNLNVVLS HEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA