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The map label for this gene is pduJ [H]

Identifier: 18309885

GI number: 18309885

Start: 1105721

End: 1106011

Strand: Direct

Name: pduJ [H]

Synonym: CPE0903

Alternate gene names: 18309885

Gene position: 1105721-1106011 (Clockwise)

Preceding gene: 18309884

Following gene: 18309886

Centisome position: 36.48

GC content: 41.58

Gene sequence:

>291_bases
ATGGCAAACGCAAACGCATTAGGAATGATCGAAACTAGAGGATTAGTAGGAGCAATAGAAGCTGCTGACGCAATGGTTAA
GGCTGCAAATGTTCAATTAGTAGGAAAAGAACAAGTTGGTGGAGGATTAGTAACTGTTATGGTTAGAGGAGATGTTGGAG
CTGTTAAAGCTGCTACTGACGCTGGAGCTGCTGCTGCTGAAAGAGTTGGAGATTTAATATCAGTACATGTAATCCCAAGA
CCACACTTTGAAGTGGATGCTATATTACCAAAGGCACCAAAAGCTGAATAA

Upstream 100 bases:

>100_bases
TCTATGTGAAATTTTAACTAAAAAGGTTTAAAATTAAATTAAAGACAAATTAAAGTCTAAATTAAAAAATTAAGAAGGAT
ATTTTGAGGAGGAATTTGTT

Downstream 100 bases:

>100_bases
TAAAAAGTTGTAATTAGGGGTTGCATAAAGAGTCTTTTATGCACTCCTTTTATACATCTAATAGGGGATGTGATAAAATG
GCTGTTTTGACAGAAGGTGA

Product: propanediol utilization protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MANANALGMIETRGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGDLISVHVIPR
PHFEVDAILPKAPKAE

Sequences:

>Translated_96_residues
MANANALGMIETRGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGDLISVHVIPR
PHFEVDAILPKAPKAE
>Mature_95_residues
ANANALGMIETRGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGDLISVHVIPRP
HFEVDAILPKAPKAE

Specific function: Involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=92, Percent_Identity=68.4782608695652, Blast_Score=107, Evalue=1e-25,
Organism=Escherichia coli, GI87082105, Length=98, Percent_Identity=46.9387755102041, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 9639; Mature: 9508

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANANALGMIETRGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATD
CCCCCCEEEEECCCCEEHHHHHHHHEEECCEEEEECCCCCCEEEEEEEECCCCCEEECCC
AGAAAAERVGDLISVHVIPRPHFEVDAILPKAPKAE
CCHHHHHHHCCEEEEEEECCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
ANANALGMIETRGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATD
CCCCCEEEEECCCCEEHHHHHHHHEEECCEEEEECCCCCCEEEEEEEECCCCCEEECCC
AGAAAAERVGDLISVHVIPRPHFEVDAILPKAPKAE
CCHHHHHHHCCEEEEEEECCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934888 [H]