| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is adhE [H]
Identifier: 18309884
GI number: 18309884
Start: 1103887
End: 1105365
Strand: Direct
Name: adhE [H]
Synonym: CPE0902
Alternate gene names: 18309884
Gene position: 1103887-1105365 (Clockwise)
Preceding gene: 18309883
Following gene: 18309885
Centisome position: 36.41
GC content: 34.96
Gene sequence:
>1479_bases ATGGAGTTTTTAGATAAAGACTTAGTTTCCATACAGGAAACTAGGGGGCTTATAAGAAAGGCTAAAGAAGCTCAAAGCAA GTTAGCCCGTATGAGTCAACAAGACATAGACAGAATAGTTAAAGCTATATCTGATGCTGCTTATGAAAATTCTGAAAAAC TTGCTAAGATGGCAAATGAGGAAACAGGATTTGGTAAATGGGAAGATAAAGTATTAAAAAATGTTTTTGCTGCAAGAACA GTTTATGAATCAATAAAGGATACAAAAACTGTTGGAATAGTAGAGGAAAATGTTGAGAAAAGAGCATTTAAAATTATGGT GCCAGTAGGAGTAGTTGCAGGACTTATACCATCAACAAATCCAACTTCAACAGCAATCTACAAAGCTATGATTTCAATAA AAGCTAGAAATGCAATTGTTTTATCACCACATCCAAGTGCAAAAAAATGTATTATTGAAACAGCTAAGATAATAGCTAAG GCTGCTGAGAGAGCAGGTTGTCCAGAAGGAGCTATAGGATGCATTACAGTACCTTCAATAGAAGGAACTAATGAACTTAT GAAGAATAAAGATACTTCATTAATCCTAGCAACAGGTGGAGAAGCAATGGTTAGAGCTGCTTATTCATCAGGAACACCAG CTATAGGTGTTGGACCAGGAAATGGACCAGCTTTCATAGATAAGAGTGCAGATGTTAAGTTAGCAGTTAAGAGAATATTA GATTCTAAAACTTTTGATAATGGAACAATATGTGCTTCAGAACAATCAATAGTAGTTGAAAAAGCTATGGAAGATGAAGT TGTTAGAGAATTAAAAGAACAAGGAGCTTACTTCTTAACTGAAGAACAAGCAAATCAACTATCTAAATTTGTAATGAGAG CAAATGGAACTATGAACCCACAAATAGTTGGAAAAACTCCACAAGACATAGCTAAGTTAGCTGGTTTAGAAGGAATTCCA TCTTGGGCAAGAGTTTTAGTTCCAAGAGAGTGCCATGTTGGACATAAGTATCCATTCTCAAGAGAAAAGTTAACAACTAT TTTAACTTTCTTTGTAGAAGAGAATGTAGATGCTGTATTAAATAGATGTAGAGAAATATTACTAAATGAAGGAGCTGGAC ATACATTCTGTATGCATGCAAATAATGAGGAGCTTGTTAAGAGATTCGCATTAGAAATGCCAGTTTCAAGAATGGTAGTA AATTCACCAGGAGCTCTTGGTGGAATAGGAGCTACAATCAACTTAGTACCTGCCTTAACTTTAGGATGTGGTGCAGTTGG AGGAAGTTCTACATCACACAACATAGGACCATTAGATTTAATGAATACAAGAAATGTAGCTTATGGAATTAGAGAACTTG AAGATATTAGAGAGTTAGCTGTAGGAGCTACAAAGGAAGTTTCCGCAAGTTTAGACTTAGGCGACAAGGAAGAGTTAATA AACTTATTAGTTAAGAAGATTATTGAGGAACTTAAGTAA
Upstream 100 bases:
>100_bases AAGCCTTAAATATGAACATAACTTCTAATAAGCTTAAGTCTCTAAAGAAGAAAGATTTAGTAGATATATTACTAAAATAT AGTGAAGAAGGTGACAGTTA
Downstream 100 bases:
>100_bases GTTTTAAGATAATTTGATTCTACTATAAATCAAAGACTTATTTAATATTAAAGATGATTTTCATTACATAGAAATGAAAA GGTATAAAAAGGCTTAATAT
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: Alcohol dehydrogenase; ADH; Acetaldehyde dehydrogenase [acetylating]; ACDH [H]
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MEFLDKDLVSIQETRGLIRKAKEAQSKLARMSQQDIDRIVKAISDAAYENSEKLAKMANEETGFGKWEDKVLKNVFAART VYESIKDTKTVGIVEENVEKRAFKIMVPVGVVAGLIPSTNPTSTAIYKAMISIKARNAIVLSPHPSAKKCIIETAKIIAK AAERAGCPEGAIGCITVPSIEGTNELMKNKDTSLILATGGEAMVRAAYSSGTPAIGVGPGNGPAFIDKSADVKLAVKRIL DSKTFDNGTICASEQSIVVEKAMEDEVVRELKEQGAYFLTEEQANQLSKFVMRANGTMNPQIVGKTPQDIAKLAGLEGIP SWARVLVPRECHVGHKYPFSREKLTTILTFFVEENVDAVLNRCREILLNEGAGHTFCMHANNEELVKRFALEMPVSRMVV NSPGALGGIGATINLVPALTLGCGAVGGSSTSHNIGPLDLMNTRNVAYGIRELEDIRELAVGATKEVSASLDLGDKEELI NLLVKKIIEELK
Sequences:
>Translated_492_residues MEFLDKDLVSIQETRGLIRKAKEAQSKLARMSQQDIDRIVKAISDAAYENSEKLAKMANEETGFGKWEDKVLKNVFAART VYESIKDTKTVGIVEENVEKRAFKIMVPVGVVAGLIPSTNPTSTAIYKAMISIKARNAIVLSPHPSAKKCIIETAKIIAK AAERAGCPEGAIGCITVPSIEGTNELMKNKDTSLILATGGEAMVRAAYSSGTPAIGVGPGNGPAFIDKSADVKLAVKRIL DSKTFDNGTICASEQSIVVEKAMEDEVVRELKEQGAYFLTEEQANQLSKFVMRANGTMNPQIVGKTPQDIAKLAGLEGIP SWARVLVPRECHVGHKYPFSREKLTTILTFFVEENVDAVLNRCREILLNEGAGHTFCMHANNEELVKRFALEMPVSRMVV NSPGALGGIGATINLVPALTLGCGAVGGSSTSHNIGPLDLMNTRNVAYGIRELEDIRELAVGATKEVSASLDLGDKEELI NLLVKKIIEELK >Mature_492_residues MEFLDKDLVSIQETRGLIRKAKEAQSKLARMSQQDIDRIVKAISDAAYENSEKLAKMANEETGFGKWEDKVLKNVFAART VYESIKDTKTVGIVEENVEKRAFKIMVPVGVVAGLIPSTNPTSTAIYKAMISIKARNAIVLSPHPSAKKCIIETAKIIAK AAERAGCPEGAIGCITVPSIEGTNELMKNKDTSLILATGGEAMVRAAYSSGTPAIGVGPGNGPAFIDKSADVKLAVKRIL DSKTFDNGTICASEQSIVVEKAMEDEVVRELKEQGAYFLTEEQANQLSKFVMRANGTMNPQIVGKTPQDIAKLAGLEGIP SWARVLVPRECHVGHKYPFSREKLTTILTFFVEENVDAVLNRCREILLNEGAGHTFCMHANNEELVKRFALEMPVSRMVV NSPGALGGIGATINLVPALTLGCGAVGGSSTSHNIGPLDLMNTRNVAYGIRELEDIRELAVGATKEVSASLDLGDKEELI NLLVKKIIEELK
Specific function: This enzyme has probably two activities:ADH, and ACDH [H]
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the iron- containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787493, Length=445, Percent_Identity=42.247191011236, Blast_Score=341, Evalue=5e-95, Organism=Escherichia coli, GI1788797, Length=381, Percent_Identity=33.3333333333333, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI87081896, Length=253, Percent_Identity=22.5296442687747, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR012079 [H]
Pfam domain/function: PF00171 Aldedh; PF00465 Fe-ADH [H]
EC number: =1.1.1.1; =1.2.1.10 [H]
Molecular weight: Translated: 53153; Mature: 53153
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLDKDLVSIQETRGLIRKAKEAQSKLARMSQQDIDRIVKAISDAAYENSEKLAKMANE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC ETGFGKWEDKVLKNVFAARTVYESIKDTKTVGIVEENVEKRAFKIMVPVGVVAGLIPSTN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHEEEEEHHHHHHHCCCCCC PTSTAIYKAMISIKARNAIVLSPHPSAKKCIIETAKIIAKAAERAGCPEGAIGCITVPSI CCHHHHHHHHHHHEECCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC EGTNELMKNKDTSLILATGGEAMVRAAYSSGTPAIGVGPGNGPAFIDKSADVKLAVKRIL CCHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCEEEECCCCCCEEECCCCCHHHHHHHHH DSKTFDNGTICASEQSIVVEKAMEDEVVRELKEQGAYFLTEEQANQLSKFVMRANGTMNP HCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCC QIVGKTPQDIAKLAGLEGIPSWARVLVPRECHVGHKYPFSREKLTTILTFFVEENVDAVL EEECCCHHHHHHHHCCCCCCHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHH NRCREILLNEGAGHTFCMHANNEELVKRFALEMPVSRMVVNSPGALGGIGATINLVPALT HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHH LGCGAVGGSSTSHNIGPLDLMNTRNVAYGIRELEDIRELAVGATKEVSASLDLGDKEELI HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHH NLLVKKIIEELK HHHHHHHHHHCC >Mature Secondary Structure MEFLDKDLVSIQETRGLIRKAKEAQSKLARMSQQDIDRIVKAISDAAYENSEKLAKMANE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC ETGFGKWEDKVLKNVFAARTVYESIKDTKTVGIVEENVEKRAFKIMVPVGVVAGLIPSTN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHEEEEEHHHHHHHCCCCCC PTSTAIYKAMISIKARNAIVLSPHPSAKKCIIETAKIIAKAAERAGCPEGAIGCITVPSI CCHHHHHHHHHHHEECCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC EGTNELMKNKDTSLILATGGEAMVRAAYSSGTPAIGVGPGNGPAFIDKSADVKLAVKRIL CCHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCEEEECCCCCCEEECCCCCHHHHHHHHH DSKTFDNGTICASEQSIVVEKAMEDEVVRELKEQGAYFLTEEQANQLSKFVMRANGTMNP HCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCC QIVGKTPQDIAKLAGLEGIPSWARVLVPRECHVGHKYPFSREKLTTILTFFVEENVDAVL EEECCCHHHHHHHHCCCCCCHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHH NRCREILLNEGAGHTFCMHANNEELVKRFALEMPVSRMVVNSPGALGGIGATINLVPALT HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHH LGCGAVGGSSTSHNIGPLDLMNTRNVAYGIRELEDIRELAVGATKEVSASLDLGDKEELI HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHH NLLVKKIIEELK HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226639; 8300540; 11466286 [H]