| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is eutB [H]
Identifier: 18309880
GI number: 18309880
Start: 1100143
End: 1101510
Strand: Direct
Name: eutB [H]
Synonym: CPE0898
Alternate gene names: 18309880
Gene position: 1100143-1101510 (Clockwise)
Preceding gene: 18309879
Following gene: 18309881
Centisome position: 36.29
GC content: 34.36
Gene sequence:
>1368_bases ATGATTTTAAAAACAAAATTATTTGGAAAAGTCTATGCTTTCAAATCTTTAAATGAGGTTATGGCTAAGGCAAACGAAGA GAAATCAGGAGATAGATTAGCTGGATTAGCAGCAGAGTCTTCAGAAGAAAGAGTAGCAGCAAAGGTTGTATTATCAAATA TAACTTTAGAGGATTTAAGAAATAACCCAGCAGTTCCTTATGAAATAGATGAGGTAACTAGAATAATTCAAGATGATGTA AATGAAAAAATATACAATGAAATAAAACATTGGACAGTATCTGAATTTAGAGAGTGGATATTAGATGAAAATACAACAGG TGCTGATATAAGAAGAATTTCAAGAGGTTTAACTTCTGAAATGGTAGCAGCTGTAGCAAAATTAATGTCTAATATGGACT TAATATATGGAGCAAGAAAAATAAAGGTAACAGCTCACTGTAACACAACAATAGGTGAAAAAGGAACTTTATCTGCAAGA CTTCAACCAAACCATCCAACAGATGATCCAGATGGAATAATGGCTTCATTATTAGAAGGATTAACTTTTGGTGTTGGAGA TGCAGTTTTAGGATTAAACCCAGTTGATGACTCTGTTGAGAGTGTTACTAAAGTATTAAAGAGATTTGATGAAATAAAAA GAAAATTTAAAATACCAACTCAAACTTGTGTACTAGCTCACGTAACAACTCAAATGGAAGCTATAAGACAAGGGGCACCT ACAGACCTAATATTCCAATCAATAGCAGGTTCTGAAAAGGGAAATGAAGCTTTTGGATTTAATGCAGCAACTATAGAAGA AGCTAGACAATTAGCTTTAAAACAAGGGACGGCTACAGGACCAAATGTAATGTACTTTGAAACAGGACAAGGTTCAGAGC TTTCATCAGATGCTCACCATGGAGTTGACCAAGTAACTATGGAAGCTAGATGTTATGGATTCGCTAAGAGATTCCAACCA TTCTTAGTTAACACAGTTGTTGGATTCATAGGACCAGAGTATTTATATGATTCAAAACAAGTTATAAGAGCAGGTCTTGA AGACCACTTCATGGGTAAATTAACAGGAATACCAATGGGATGTGATGCATGTTATACAAACCACATGAAAGCAGACCAAA ATGATATAGAAAACTTAGCTGTATTATTAACAACAGCAGGATGTACTTATTTCATGGGAATTCCACATGGAGATGACGTA ATGCTTAACTATCAAACTACAGGATACCATGAAACAGCAGCTTTAAGAGAAATGTTTGGATTAACAGCTATTAAAGAGTT CCAAGATTGGTTAGTTGAAATGGGATTCGTAGACGAAAATGGAAAGCTTACTAAAAAAGCAGGAGATGCATCTGTACTTT TAGGATAG
Upstream 100 bases:
>100_bases TGGAGATTACATAGACCTTGGAACACCAATTGCAGATGGGAAAGTATTACCTGTTGTTATAAAAACATTAGTTTTCAACT AGTTGGAAGGAGGATAAGAA
Downstream 100 bases:
>100_bases GAGGGAGAAGAGAGTTATGAACGAAAAAGATTTAAAACTAATGGTTGAGCAATTAGTTAGCCAAATGGTTGGACAAGTTG ATATGCAATCAGTAGAAAAA
Product: ethanolamine ammonia lyase heavy chain
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase large subunit [H]
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MILKTKLFGKVYAFKSLNEVMAKANEEKSGDRLAGLAAESSEERVAAKVVLSNITLEDLRNNPAVPYEIDEVTRIIQDDV NEKIYNEIKHWTVSEFREWILDENTTGADIRRISRGLTSEMVAAVAKLMSNMDLIYGARKIKVTAHCNTTIGEKGTLSAR LQPNHPTDDPDGIMASLLEGLTFGVGDAVLGLNPVDDSVESVTKVLKRFDEIKRKFKIPTQTCVLAHVTTQMEAIRQGAP TDLIFQSIAGSEKGNEAFGFNAATIEEARQLALKQGTATGPNVMYFETGQGSELSSDAHHGVDQVTMEARCYGFAKRFQP FLVNTVVGFIGPEYLYDSKQVIRAGLEDHFMGKLTGIPMGCDACYTNHMKADQNDIENLAVLLTTAGCTYFMGIPHGDDV MLNYQTTGYHETAALREMFGLTAIKEFQDWLVEMGFVDENGKLTKKAGDASVLLG
Sequences:
>Translated_455_residues MILKTKLFGKVYAFKSLNEVMAKANEEKSGDRLAGLAAESSEERVAAKVVLSNITLEDLRNNPAVPYEIDEVTRIIQDDV NEKIYNEIKHWTVSEFREWILDENTTGADIRRISRGLTSEMVAAVAKLMSNMDLIYGARKIKVTAHCNTTIGEKGTLSAR LQPNHPTDDPDGIMASLLEGLTFGVGDAVLGLNPVDDSVESVTKVLKRFDEIKRKFKIPTQTCVLAHVTTQMEAIRQGAP TDLIFQSIAGSEKGNEAFGFNAATIEEARQLALKQGTATGPNVMYFETGQGSELSSDAHHGVDQVTMEARCYGFAKRFQP FLVNTVVGFIGPEYLYDSKQVIRAGLEDHFMGKLTGIPMGCDACYTNHMKADQNDIENLAVLLTTAGCTYFMGIPHGDDV MLNYQTTGYHETAALREMFGLTAIKEFQDWLVEMGFVDENGKLTKKAGDASVLLG >Mature_455_residues MILKTKLFGKVYAFKSLNEVMAKANEEKSGDRLAGLAAESSEERVAAKVVLSNITLEDLRNNPAVPYEIDEVTRIIQDDV NEKIYNEIKHWTVSEFREWILDENTTGADIRRISRGLTSEMVAAVAKLMSNMDLIYGARKIKVTAHCNTTIGEKGTLSAR LQPNHPTDDPDGIMASLLEGLTFGVGDAVLGLNPVDDSVESVTKVLKRFDEIKRKFKIPTQTCVLAHVTTQMEAIRQGAP TDLIFQSIAGSEKGNEAFGFNAATIEEARQLALKQGTATGPNVMYFETGQGSELSSDAHHGVDQVTMEARCYGFAKRFQP FLVNTVVGFIGPEYLYDSKQVIRAGLEDHFMGKLTGIPMGCDACYTNHMKADQNDIENLAVLLTTAGCTYFMGIPHGDDV MLNYQTTGYHETAALREMFGLTAIKEFQDWLVEMGFVDENGKLTKKAGDASVLLG
Specific function: Ethanolamine utilization. [C]
COG id: COG4303
COG function: function code E; Ethanolamine ammonia-lyase, large subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082106, Length=454, Percent_Identity=61.4537444933921, Blast_Score=575, Evalue=1e-165,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010628 [H]
Pfam domain/function: PF06751 EutB [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 50034; Mature: 50034
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKTKLFGKVYAFKSLNEVMAKANEEKSGDRLAGLAAESSEERVAAKVVLSNITLEDLR CEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHHHCCHHHHC NNPAVPYEIDEVTRIIQDDVNEKIYNEIKHWTVSEFREWILDENTTGADIRRISRGLTSE CCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH MVAAVAKLMSNMDLIYGARKIKVTAHCNTTIGEKGTLSARLQPNHPTDDPDGIMASLLEG HHHHHHHHHHCCHHHCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH LTFGVGDAVLGLNPVDDSVESVTKVLKRFDEIKRKFKIPTQTCVLAHVTTQMEAIRQGAP HHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC TDLIFQSIAGSEKGNEAFGFNAATIEEARQLALKQGTATGPNVMYFETGQGSELSSDAHH HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHC GVDQVTMEARCYGFAKRFQPFLVNTVVGFIGPEYLYDSKQVIRAGLEDHFMGKLTGIPMG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHCHHHHHHHHHCCCCCC CDACYTNHMKADQNDIENLAVLLTTAGCTYFMGIPHGDDVMLNYQTTGYHETAALREMFG CHHHHHCCCCCCHHHHHHHHHHHEECCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHH LTAIKEFQDWLVEMGFVDENGKLTKKAGDASVLLG HHHHHHHHHHHHHHCEECCCCCEEECCCCCCEECC >Mature Secondary Structure MILKTKLFGKVYAFKSLNEVMAKANEEKSGDRLAGLAAESSEERVAAKVVLSNITLEDLR CEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHHHCCHHHHC NNPAVPYEIDEVTRIIQDDVNEKIYNEIKHWTVSEFREWILDENTTGADIRRISRGLTSE CCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH MVAAVAKLMSNMDLIYGARKIKVTAHCNTTIGEKGTLSARLQPNHPTDDPDGIMASLLEG HHHHHHHHHHCCHHHCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH LTFGVGDAVLGLNPVDDSVESVTKVLKRFDEIKRKFKIPTQTCVLAHVTTQMEAIRQGAP HHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC TDLIFQSIAGSEKGNEAFGFNAATIEEARQLALKQGTATGPNVMYFETGQGSELSSDAHH HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHC GVDQVTMEARCYGFAKRFQPFLVNTVVGFIGPEYLYDSKQVIRAGLEDHFMGKLTGIPMG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHCHHHHHHHHHCCCCCC CDACYTNHMKADQNDIENLAVLLTTAGCTYFMGIPHGDDVMLNYQTTGYHETAALREMFG CHHHHHCCCCCCHHHHHHHHHHHEECCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHH LTAIKEFQDWLVEMGFVDENGKLTKKAGDASVLLG HHHHHHHHHHHHHHCEECCCCCEEECCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]