| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is eutC
Identifier: 18309881
GI number: 18309881
Start: 1101527
End: 1102414
Strand: Direct
Name: eutC
Synonym: CPE0899
Alternate gene names: 18309881
Gene position: 1101527-1102414 (Clockwise)
Preceding gene: 18309880
Following gene: 18309882
Centisome position: 36.34
GC content: 34.35
Gene sequence:
>888_bases ATGAACGAAAAAGATTTAAAACTAATGGTTGAGCAATTAGTTAGCCAAATGGTTGGACAAGTTGATATGCAATCAGTAGA AAAAGTGGTTAAGGAAGTTTCAAAAAATCAATCTCAAGTGGAAAGTGATGAATTTATACCAGATATTACAGAGATAGATA TAAAGAAACAACTTTTAGTTGATAATCCAGCTGATAGAGAGGCTTACTTAGAAATGAAAGCTAAAACTCCAGCTAGATTA GGATCAGGAAGAGCAGGAGCTAGATATAAAACTATAACAGCTTTAAGAATGAGAGCTGACCATGCTGCTGCACAAGACTC AGTATTCTCAGATGTTTCAGAGGAATTCATAAAGAAAAATAATTTTATACCTGTGAAAACTATGTGTACTGATAAGGATG AATATGTAACTCGTCCAGACCTTGGAAGAAGATTTTCGCCAGAAACAACAGAGATTATAAAAGAAAAATGTGATAAAAAT CCTAAGGTTCAAATAATGGTTGGAGATGGTTTAAGTTCAGCTGCAATAGAAGCTAACGTAGAAGATATTCTTCCTTCAAT AGAGCAAGGATTAAAAATGTATGGTTTAAATGTTGGACCTATATTATTCGTTAAATATTGTAGAGTTCCAGCTATGGATG CTGTAGGAGAAGCAACTGGAGCAGATGTTGTTTGCTTACTAGTTGGAGAAAGACCAGGTCTTGTAACTGCTGAGTCAATG TCAGCATATATAGCATATAAACCAAAGGTTGGAATGCCAGAAGCTAAGAGAACTGTTATATCAAACATTCATAAAGGTGG AACAACTGCCGTTGAAGCAGGAGCTCACATTGCAGAGTTAATAAAAACAATGTTAGATAAAAAAGCTTCAGGAATAGATC TTAAATAA
Upstream 100 bases:
>100_bases GATTGGTTAGTTGAAATGGGATTCGTAGACGAAAATGGAAAGCTTACTAAAAAAGCAGGAGATGCATCTGTACTTTTAGG ATAGGAGGGAGAAGAGAGTT
Downstream 100 bases:
>100_bases TAAGTTTGGAGGGAATTAAGCATGAAAAATGATTTAATACGTCCTAATGTTTTAAGCGTTAAGATAATATCAAATGTTAG TCCAGAAATGGCTAAAAAAT
Product: ethanolamine ammonia-lyase small subunit
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase small subunit
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MNEKDLKLMVEQLVSQMVGQVDMQSVEKVVKEVSKNQSQVESDEFIPDITEIDIKKQLLVDNPADREAYLEMKAKTPARL GSGRAGARYKTITALRMRADHAAAQDSVFSDVSEEFIKKNNFIPVKTMCTDKDEYVTRPDLGRRFSPETTEIIKEKCDKN PKVQIMVGDGLSSAAIEANVEDILPSIEQGLKMYGLNVGPILFVKYCRVPAMDAVGEATGADVVCLLVGERPGLVTAESM SAYIAYKPKVGMPEAKRTVISNIHKGGTTAVEAGAHIAELIKTMLDKKASGIDLK
Sequences:
>Translated_295_residues MNEKDLKLMVEQLVSQMVGQVDMQSVEKVVKEVSKNQSQVESDEFIPDITEIDIKKQLLVDNPADREAYLEMKAKTPARL GSGRAGARYKTITALRMRADHAAAQDSVFSDVSEEFIKKNNFIPVKTMCTDKDEYVTRPDLGRRFSPETTEIIKEKCDKN PKVQIMVGDGLSSAAIEANVEDILPSIEQGLKMYGLNVGPILFVKYCRVPAMDAVGEATGADVVCLLVGERPGLVTAESM SAYIAYKPKVGMPEAKRTVISNIHKGGTTAVEAGAHIAELIKTMLDKKASGIDLK >Mature_295_residues MNEKDLKLMVEQLVSQMVGQVDMQSVEKVVKEVSKNQSQVESDEFIPDITEIDIKKQLLVDNPADREAYLEMKAKTPARL GSGRAGARYKTITALRMRADHAAAQDSVFSDVSEEFIKKNNFIPVKTMCTDKDEYVTRPDLGRRFSPETTEIIKEKCDKN PKVQIMVGDGLSSAAIEANVEDILPSIEQGLKMYGLNVGPILFVKYCRVPAMDAVGEATGADVVCLLVGERPGLVTAESM SAYIAYKPKVGMPEAKRTVISNIHKGGTTAVEAGAHIAELIKTMLDKKASGIDLK
Specific function: Ethanolamine utilization. [C]
COG id: COG4302
COG function: function code E; Ethanolamine ammonia-lyase, small subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutC family
Homologues:
Organism=Escherichia coli, GI1788781, Length=295, Percent_Identity=42.0338983050847, Blast_Score=229, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): EUTC_CLOP1 (Q0TSP9)
Other databases:
- EMBL: CP000246 - RefSeq: YP_695341.1 - STRING: Q0TSP9 - GeneID: 4202813 - GenomeReviews: CP000246_GR - KEGG: cpf:CPF_0892 - TIGR: CPF_0892 - eggNOG: COG4302 - HOGENOM: HBG363176 - OMA: IHKGGTP - ProtClustDB: PRK05465 - BioCyc: CPER195103:CPF_0892-MONOMER - HAMAP: MF_00601 - InterPro: IPR009246 - PIRSF: PIRSF018982
Pfam domain/function: PF05985 EutC
EC number: =4.3.1.7
Molecular weight: Translated: 32310; Mature: 32310
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKDLKLMVEQLVSQMVGQVDMQSVEKVVKEVSKNQSQVESDEFIPDITEIDIKKQLLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHC DNPADREAYLEMKAKTPARLGSGRAGARYKTITALRMRADHAAAQDSVFSDVSEEFIKKN CCCCCCHHHHEECCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NFIPVKTMCTDKDEYVTRPDLGRRFSPETTEIIKEKCDKNPKVQIMVGDGLSSAAIEANV CCEEEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCH EDILPSIEQGLKMYGLNVGPILFVKYCRVPAMDAVGEATGADVVCLLVGERPGLVTAESM HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCEEEHHCC SAYIAYKPKVGMPEAKRTVISNIHKGGTTAVEAGAHIAELIKTMLDKKASGIDLK CEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNEKDLKLMVEQLVSQMVGQVDMQSVEKVVKEVSKNQSQVESDEFIPDITEIDIKKQLLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHC DNPADREAYLEMKAKTPARLGSGRAGARYKTITALRMRADHAAAQDSVFSDVSEEFIKKN CCCCCCHHHHEECCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NFIPVKTMCTDKDEYVTRPDLGRRFSPETTEIIKEKCDKNPKVQIMVGDGLSSAAIEANV CCEEEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCH EDILPSIEQGLKMYGLNVGPILFVKYCRVPAMDAVGEATGADVVCLLVGERPGLVTAESM HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCEEEHHCC SAYIAYKPKVGMPEAKRTVISNIHKGGTTAVEAGAHIAELIKTMLDKKASGIDLK CEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA