Click here to switch to the map view.

The map label for this gene is pdtaS [H]

Identifier: 18309878

GI number: 18309878

Start: 1097054

End: 1098481

Strand: Direct

Name: pdtaS [H]

Synonym: CPE0896

Alternate gene names: 18309878

Gene position: 1097054-1098481 (Clockwise)

Preceding gene: 18309877

Following gene: 18309879

Centisome position: 36.19

GC content: 27.24

Gene sequence:

>1428_bases
ATGATTGGAACACTATGTAAAGAATACACTCTTTTAAGTGAAGAGGAGATAAATAAAATAAGAGAAGTTTCAAAATCTCT
ACAGATTATGGCTGACTTTTATGAAAGTGATGCATTTATAGATGTTTTAGATAAAGAGGGAAACTTTGCTATTGTAGTAG
ACCATGCTATTCCAAAAGATAAGCCTTCATTATATAAAGAAAAAGTAGTTGGAAAAAAAGCTTTAAAGGAAAATGAGCCA
GGTGTTATAGAAACATTAAAAAATGGAACAGTTAATAAGGATATAAAAGCACTGACTCAAGAAAATAAGTTTGTAAAACA
AAGAATACATCCAATTCTTAATGAAGAAAAGGTTGTAGGAGTTGTTATAGTAGAAAAAGATATTAGTAATGAGCTTGAAA
GTGATTTCAAAATTGATATAAGTTCTGCAAATGAAAGTTCAGAATCAAAGGGGTTTTTAAATCTTTTAAGAGAAGGTACT
TTAATAACAAATAATCTTCATGATGGAATACTTGTTTTTGATAAAAAAGGAAAGCTTGTTATAAAAAATACTAAAGCAGA
TAATATATATAGTAGTTTAGGATATAAAAGTATAGACTATGGAGATGATTTTAATAAATTGTCTTTAGATAATTCCAAGT
TTGAAGATCTTTCAAATGTTATTGGAGAAAAGAGTGACTTAAAACAAATAATAGAAGTTCAAGTGAAAAATTCTTATTTT
GAATTAAGTAGAACCTTTATAGATAAAGAAAACTTAAGAATAATTGAGATAATAAAAGACATAAGTGATGTTAAGAATAA
AGAGGCTGAGTTAGTTTTAAAATCAGTGGCATTAAGAGAAGCTCATCATAGGGTTAAAAATAGTTTGCAAACAGCAGCGG
CATTACTTAGAAGTCAAAGTAGAAGATGCAAAAGTGAAGAGGCTAAGGAATATTTACAGGAAAGTGTAAACAGAATACTT
GCTATTGCTACAACTCACGATTTATTATCTAAATCTCAAGGAAATAATATTAAGGTTAGAGATGCACTTGAGGTACTAAC
AGAAAATATAAAGAAAAGTTGGTATGGATCTAATATAAACATCTATATAACAGGAAATAATTTTTATATAGATGGAGAAA
AGCTAACTGGATTACTCTTAATAATGAATGAACTTATACAAAATTGTTTTGATCATGCATTTATTAATAAAGATGAAGGT
ACAATACAGATTCTTATACAAAGTGATGGAGAAGATAAAGCCATAGCTGTTGTGGATGATGGATGTGGATTTGACTTAGG
TTTGATTAACAATAATAATTTAGGATTATTCATAGTTAATAGTTACATAAAGGATCAGCTAAAAGGAAGTATGAATATAA
CTTCTAATAAAGAAGGAACCAAGGTACTATTAAATTTTAAAATTGAAGAAAATGAAGAATTTAAATAA

Upstream 100 bases:

>100_bases
GAATGATGCTTATAACAGAATAAGAAAATTAAGTATGGATAGAAGAACTACCATGGCTGAAATAGCAAAAATAATAATTG
TTGGTTATGAGGGATAATTA

Downstream 100 bases:

>100_bases
CTATGAACTGCGAAGTAGTGGTTTGAATTGAGCAATGAGGCTTAAGGTTATAGAAAATAAAACTTAGATTTTTAAATCAG
GTTTATTTCTGTAGCTTTAA

Product: two-component sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MIGTLCKEYTLLSEEEINKIREVSKSLQIMADFYESDAFIDVLDKEGNFAIVVDHAIPKDKPSLYKEKVVGKKALKENEP
GVIETLKNGTVNKDIKALTQENKFVKQRIHPILNEEKVVGVVIVEKDISNELESDFKIDISSANESSESKGFLNLLREGT
LITNNLHDGILVFDKKGKLVIKNTKADNIYSSLGYKSIDYGDDFNKLSLDNSKFEDLSNVIGEKSDLKQIIEVQVKNSYF
ELSRTFIDKENLRIIEIIKDISDVKNKEAELVLKSVALREAHHRVKNSLQTAAALLRSQSRRCKSEEAKEYLQESVNRIL
AIATTHDLLSKSQGNNIKVRDALEVLTENIKKSWYGSNINIYITGNNFYIDGEKLTGLLLIMNELIQNCFDHAFINKDEG
TIQILIQSDGEDKAIAVVDDGCGFDLGLINNNNLGLFIVNSYIKDQLKGSMNITSNKEGTKVLLNFKIEENEEFK

Sequences:

>Translated_475_residues
MIGTLCKEYTLLSEEEINKIREVSKSLQIMADFYESDAFIDVLDKEGNFAIVVDHAIPKDKPSLYKEKVVGKKALKENEP
GVIETLKNGTVNKDIKALTQENKFVKQRIHPILNEEKVVGVVIVEKDISNELESDFKIDISSANESSESKGFLNLLREGT
LITNNLHDGILVFDKKGKLVIKNTKADNIYSSLGYKSIDYGDDFNKLSLDNSKFEDLSNVIGEKSDLKQIIEVQVKNSYF
ELSRTFIDKENLRIIEIIKDISDVKNKEAELVLKSVALREAHHRVKNSLQTAAALLRSQSRRCKSEEAKEYLQESVNRIL
AIATTHDLLSKSQGNNIKVRDALEVLTENIKKSWYGSNINIYITGNNFYIDGEKLTGLLLIMNELIQNCFDHAFINKDEG
TIQILIQSDGEDKAIAVVDDGCGFDLGLINNNNLGLFIVNSYIKDQLKGSMNITSNKEGTKVLLNFKIEENEEFK
>Mature_475_residues
MIGTLCKEYTLLSEEEINKIREVSKSLQIMADFYESDAFIDVLDKEGNFAIVVDHAIPKDKPSLYKEKVVGKKALKENEP
GVIETLKNGTVNKDIKALTQENKFVKQRIHPILNEEKVVGVVIVEKDISNELESDFKIDISSANESSESKGFLNLLREGT
LITNNLHDGILVFDKKGKLVIKNTKADNIYSSLGYKSIDYGDDFNKLSLDNSKFEDLSNVIGEKSDLKQIIEVQVKNSYF
ELSRTFIDKENLRIIEIIKDISDVKNKEAELVLKSVALREAHHRVKNSLQTAAALLRSQSRRCKSEEAKEYLQESVNRIL
AIATTHDLLSKSQGNNIKVRDALEVLTENIKKSWYGSNINIYITGNNFYIDGEKLTGLLLIMNELIQNCFDHAFINKDEG
TIQILIQSDGEDKAIAVVDDGCGFDLGLINNNNLGLFIVNSYIKDQLKGSMNITSNKEGTKVLLNFKIEENEEFK

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 53568; Mature: 53568

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGTLCKEYTLLSEEEINKIREVSKSLQIMADFYESDAFIDVLDKEGNFAIVVDHAIPKD
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCC
KPSLYKEKVVGKKALKENEPGVIETLKNGTVNKDIKALTQENKFVKQRIHPILNEEKVVG
CHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VVIVEKDISNELESDFKIDISSANESSESKGFLNLLREGTLITNNLHDGILVFDKKGKLV
EEEEECHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEECCCCCCEEEEECCCCEE
IKNTKADNIYSSLGYKSIDYGDDFNKLSLDNSKFEDLSNVIGEKSDLKQIIEVQVKNSYF
EECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHH
ELSRTFIDKENLRIIEIIKDISDVKNKEAELVLKSVALREAHHRVKNSLQTAAALLRSQS
HHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRCKSEEAKEYLQESVNRILAIATTHDLLSKSQGNNIKVRDALEVLTENIKKSWYGSNIN
HHCCHHHHHHHHHHHHHHHEEEEEHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCEE
IYITGNNFYIDGEKLTGLLLIMNELIQNCFDHAFINKDEGTIQILIQSDGEDKAIAVVDD
EEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEC
GCGFDLGLINNNNLGLFIVNSYIKDQLKGSMNITSNKEGTKVLLNFKIEENEEFK
CCCCEEEEEECCCEEEEEEEHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MIGTLCKEYTLLSEEEINKIREVSKSLQIMADFYESDAFIDVLDKEGNFAIVVDHAIPKD
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCC
KPSLYKEKVVGKKALKENEPGVIETLKNGTVNKDIKALTQENKFVKQRIHPILNEEKVVG
CHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VVIVEKDISNELESDFKIDISSANESSESKGFLNLLREGTLITNNLHDGILVFDKKGKLV
EEEEECHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEECCCCCCEEEEECCCCEE
IKNTKADNIYSSLGYKSIDYGDDFNKLSLDNSKFEDLSNVIGEKSDLKQIIEVQVKNSYF
EECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHH
ELSRTFIDKENLRIIEIIKDISDVKNKEAELVLKSVALREAHHRVKNSLQTAAALLRSQS
HHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRCKSEEAKEYLQESVNRILAIATTHDLLSKSQGNNIKVRDALEVLTENIKKSWYGSNIN
HHCCHHHHHHHHHHHHHHHEEEEEHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCEE
IYITGNNFYIDGEKLTGLLLIMNELIQNCFDHAFINKDEGTIQILIQSDGEDKAIAVVDD
EEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEC
GCGFDLGLINNNNLGLFIVNSYIKDQLKGSMNITSNKEGTKVLLNFKIEENEEFK
CCCCEEEEEECCCEEEEEEEHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]