| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309858
Identifier: 18309858
GI number: 18309858
Start: 1076721
End: 1077164
Strand: Direct
Name: 18309858
Synonym: CPE0876
Alternate gene names: NA
Gene position: 1076721-1077164 (Clockwise)
Preceding gene: 18309857
Following gene: 18309861
Centisome position: 35.52
GC content: 31.98
Gene sequence:
>444_bases ATGAGTAATATATATGAGTTTAAAAAAGAAGACTTAAATGAATGTGCTGAGCTTTTTGTTAAAACCTTTAGTAAGGAACC ATGGAATGAACCTTGGGATTTTGAAAATGCTAAAAAAAGACTTAATGATGTGGTTTTAACTCCAGGATTTAGGGGTGCTG TTTTAAGAAATGATGAAAAAATAGAAGGGGTTATTTTAGGAAATTTAGAGCAATGGTATGATGGAGAGCATTTTTGTGTT AAGGAATTCTTTGTGGATTCAAGTTCACAGGGGAAAGGAACAGGAAAGAAACTTTTAAATGCCTTAGAGGATATACTTAT GGAAAAGGAAGTGGGAGTAATTCACTTTTGGACTATGAAAGGAAGCACAGCTGAAGCCTTTTATAATAAAAGAGGGTATG AAATTCCAAAGGAATTAATAATGATGAGAAAAAAGTTAAAATAG
Upstream 100 bases:
>100_bases TATATATAAATTATAGAATAATAATTAAATTAGGGGATGAAGAGACTCATCTCCTAATTTAATTCTAGTTGAATTTTAAA ATAATGGGAGTATAAGAATT
Downstream 100 bases:
>100_bases TAAATTTTTAAATAATGAAGGTCTAGTTGACAATTAAAATTATTTTAATACACCTAGAAATTAAAAAATTTAAAATAATA CTATATGTTAAATTTTAATA
Product: GNAT family acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; GCN5-Related N-Acetyltransferase; Spermine/Spermidine Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Family Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSNIYEFKKEDLNECAELFVKTFSKEPWNEPWDFENAKKRLNDVVLTPGFRGAVLRNDEKIEGVILGNLEQWYDGEHFCV KEFFVDSSSQGKGTGKKLLNALEDILMEKEVGVIHFWTMKGSTAEAFYNKRGYEIPKELIMMRKKLK
Sequences:
>Translated_147_residues MSNIYEFKKEDLNECAELFVKTFSKEPWNEPWDFENAKKRLNDVVLTPGFRGAVLRNDEKIEGVILGNLEQWYDGEHFCV KEFFVDSSSQGKGTGKKLLNALEDILMEKEVGVIHFWTMKGSTAEAFYNKRGYEIPKELIMMRKKLK >Mature_146_residues SNIYEFKKEDLNECAELFVKTFSKEPWNEPWDFENAKKRLNDVVLTPGFRGAVLRNDEKIEGVILGNLEQWYDGEHFCVK EFFVDSSSQGKGTGKKLLNALEDILMEKEVGVIHFWTMKGSTAEAFYNKRGYEIPKELIMMRKKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17151; Mature: 17020
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIYEFKKEDLNECAELFVKTFSKEPWNEPWDFENAKKRLNDVVLTPGFRGAVLRNDEK CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCCCCCEECCCCC IEGVILGNLEQWYDGEHFCVKEFFVDSSSQGKGTGKKLLNALEDILMEKEVGVIHFWTMK CCEEEECCHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECC GSTAEAFYNKRGYEIPKELIMMRKKLK CCHHHHHHHCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SNIYEFKKEDLNECAELFVKTFSKEPWNEPWDFENAKKRLNDVVLTPGFRGAVLRNDEK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCCCCCEECCCCC IEGVILGNLEQWYDGEHFCVKEFFVDSSSQGKGTGKKLLNALEDILMEKEVGVIHFWTMK CCEEEECCHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECC GSTAEAFYNKRGYEIPKELIMMRKKLK CCHHHHHHHCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA