| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is yjhQ [H]
Identifier: 18309861
GI number: 18309861
Start: 1080208
End: 1080750
Strand: Direct
Name: yjhQ [H]
Synonym: CPE0879
Alternate gene names: 18309861
Gene position: 1080208-1080750 (Clockwise)
Preceding gene: 18309858
Following gene: 18309863
Centisome position: 35.63
GC content: 29.47
Gene sequence:
>543_bases ATGAAAGTAATTGTTAGAAAAGAGTTAGAACAAGATCATAAAACAGTAGAACTTTTAGTAGAAGAAGCCTTTAAAGATGC TGAGTACAGTGATCATATGGAACATGTTTTAGTTAGTAAACTTAGAAAGGGAGAAAACTTTATTGATGGCTTATCTTTAG TTGCTGAAAGAGAAGGGGAAATAGTAGGACACATATTATTAACTAAAGCTAATATAGAAAATGAAACAGAAAAATATGAA ACTTTAGCCTTAGCACCAGTTTCAGTATTACCTAAATATCAAGGTATTGGAATTGGAGGAGAACTTATAAGAGAAGGAAT GAGAATGGCTAAGGAACTTGGATATGATTCAATAATAGTTTTAGGACATGATAAATACTATCCTAAATTTGGATTTAAAA AAGCTGGAGATTTTGGAATAAAAGCTCCTTTTGAAGTGCCAGAAGAAAACTTTATGGCAATAGAATTAAATGAAGAAGCT TTAAAAAATATAAGTGGTGTTGTAAGATATGCTAATGAATTTTTAGCAGATAATAATAAGTAA
Upstream 100 bases:
>100_bases TACATATATGGTTCTTAAATTTAAAAGTAATTATTTTACATAAAATATATCTTAATTTTTAAATTTAAGAATAAAACGTA TGAGAAAGGATGTTGTAGTT
Downstream 100 bases:
>100_bases TAACTTTGATATATTTATTTAAATATTAATTAAATATTGAGACTATAGTTGTATTAATTTAAGGTAAAATAATAAGGTGG TTGTATAAAAAAATTATAAG
Product: GNAT family acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MKVIVRKELEQDHKTVELLVEEAFKDAEYSDHMEHVLVSKLRKGENFIDGLSLVAEREGEIVGHILLTKANIENETEKYE TLALAPVSVLPKYQGIGIGGELIREGMRMAKELGYDSIIVLGHDKYYPKFGFKKAGDFGIKAPFEVPEENFMAIELNEEA LKNISGVVRYANEFLADNNK
Sequences:
>Translated_180_residues MKVIVRKELEQDHKTVELLVEEAFKDAEYSDHMEHVLVSKLRKGENFIDGLSLVAEREGEIVGHILLTKANIENETEKYE TLALAPVSVLPKYQGIGIGGELIREGMRMAKELGYDSIIVLGHDKYYPKFGFKKAGDFGIKAPFEVPEENFMAIELNEEA LKNISGVVRYANEFLADNNK >Mature_180_residues MKVIVRKELEQDHKTVELLVEEAFKDAEYSDHMEHVLVSKLRKGENFIDGLSLVAEREGEIVGHILLTKANIENETEKYE TLALAPVSVLPKYQGIGIGGELIREGMRMAKELGYDSIIVLGHDKYYPKFGFKKAGDFGIKAPFEVPEENFMAIELNEEA LKNISGVVRYANEFLADNNK
Specific function: Unknown
COG id: COG3153
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1790761, Length=140, Percent_Identity=40.7142857142857, Blast_Score=110, Evalue=4e-26, Organism=Escherichia coli, GI1789546, Length=174, Percent_Identity=28.735632183908, Blast_Score=80, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 20316; Mature: 20316
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIVRKELEQDHKTVELLVEEAFKDAEYSDHMEHVLVSKLRKGENFIDGLSLVAEREGE CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC IVGHILLTKANIENETEKYETLALAPVSVLPKYQGIGIGGELIREGMRMAKELGYDSIIV EEEEEEEEECCCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE LGHDKYYPKFGFKKAGDFGIKAPFEVPEENFMAIELNEEALKNISGVVRYANEFLADNNK EECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKVIVRKELEQDHKTVELLVEEAFKDAEYSDHMEHVLVSKLRKGENFIDGLSLVAEREGE CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC IVGHILLTKANIENETEKYETLALAPVSVLPKYQGIGIGGELIREGMRMAKELGYDSIIV EEEEEEEEECCCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE LGHDKYYPKFGFKKAGDFGIKAPFEVPEENFMAIELNEEALKNISGVVRYANEFLADNNK EECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]