| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is fhuB [H]
Identifier: 18309793
GI number: 18309793
Start: 995087
End: 996100
Strand: Direct
Name: fhuB [H]
Synonym: CPE0811
Alternate gene names: 18309793
Gene position: 995087-996100 (Clockwise)
Preceding gene: 18309792
Following gene: 18309794
Centisome position: 32.83
GC content: 32.54
Gene sequence:
>1014_bases ATGAAAATAGGAAGGAAAAGGACCTTGGCTTATGGATTAATGTTTATAGGTTTATTACTTTTGCTTAGTGGAATCATTCT ATCTATATCTATAGGGGCAAAAGAAATTGATTTTTCTATGATAATAAATGCTATTTTTACAAATGATGCAGATATAAATA CTAATATAATTAGGGATGTAAGAATACCTAGAGCACTTGCAGCGGCTTTAGTAGGAGGATTTTTAGCCGTAGCTGGTGCC ATCATGCAAGGAATAACTAGAAATCCAATTGCAGAACCTTCTGTAATGGGTATAACTCAAGGAGCTACATTTATGATAGC TGTAGCATTTGTTTTACAAAGAATATATCCTAATTTAGTTATAAATAGCTTTGCTCTTATGATTTTTGCATTTTTAGGAG CAAGTATAAGTGGTCTTTTAGTATATTTTATAAGCTCTAGAGCATCTAGAAAAGTTGATCCTGTTAAGTTAGCTCTTGCA GGAACAGCCTTAGGAACTTTACTTATATCCTTAGCAATGGGAATATCAATGTATTTTAATTTATCTCAACAGTTAAGTTT CTGGGTATCAGGTGGACTGGTAAGTGCTAAATGGGAAGGGGTAATTTTATTAGCTTTAATTGGAGGAATAGCATTTATTG GGGCCATGATTATGTCACCTAGAATAACAATTTTGAGTTTAGGAGAAGAAGTAGCCATAGGACTTGGACAAAAAACTAAT CTTGTAAGGTTTATATCCATAATGATAGTTATATGTCTAACAGGTGCTTCTGTTTCAGTAGCTGGTAATATTGTCTTTGT AGGATTAATAATTCCTCAAATATGCAAAGGAATAGTAGGATCTGATTATAGATATATAATACCTAGCTCAATGATATTAG GTGCTGTTTTATTAGTGTATAGTGATATATTAGCAAGGATTATAAACCCTCCTTATGAAACACCAATAGGATCTTTAACT GCCTTATTAGGAGTGCCAGTGTTTATATACTTAGTTAGAAAGGGAGGTAAGTAA
Upstream 100 bases:
>100_bases AATTAAAATTTTTAGTAGGGGCTGTATCAAAATATAAGGATACAGCCCCACTATTTAAGTTAAAATAGAAATTTTGGTGA TACTTTAAGGAGGACAACTT
Downstream 100 bases:
>100_bases TTTATGAATATAAAAAAGAATCATAAATTTATATGGGTAACGGGAATTTTAATAGGTTTAATTTTTATTACCTTTTTAAT AAGTTTAAACATGGGTTCAC
Product: ferrichrome ABC transporter
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MKIGRKRTLAYGLMFIGLLLLLSGIILSISIGAKEIDFSMIINAIFTNDADINTNIIRDVRIPRALAAALVGGFLAVAGA IMQGITRNPIAEPSVMGITQGATFMIAVAFVLQRIYPNLVINSFALMIFAFLGASISGLLVYFISSRASRKVDPVKLALA GTALGTLLISLAMGISMYFNLSQQLSFWVSGGLVSAKWEGVILLALIGGIAFIGAMIMSPRITILSLGEEVAIGLGQKTN LVRFISIMIVICLTGASVSVAGNIVFVGLIIPQICKGIVGSDYRYIIPSSMILGAVLLVYSDILARIINPPYETPIGSLT ALLGVPVFIYLVRKGGK
Sequences:
>Translated_337_residues MKIGRKRTLAYGLMFIGLLLLLSGIILSISIGAKEIDFSMIINAIFTNDADINTNIIRDVRIPRALAAALVGGFLAVAGA IMQGITRNPIAEPSVMGITQGATFMIAVAFVLQRIYPNLVINSFALMIFAFLGASISGLLVYFISSRASRKVDPVKLALA GTALGTLLISLAMGISMYFNLSQQLSFWVSGGLVSAKWEGVILLALIGGIAFIGAMIMSPRITILSLGEEVAIGLGQKTN LVRFISIMIVICLTGASVSVAGNIVFVGLIIPQICKGIVGSDYRYIIPSSMILGAVLLVYSDILARIINPPYETPIGSLT ALLGVPVFIYLVRKGGK >Mature_337_residues MKIGRKRTLAYGLMFIGLLLLLSGIILSISIGAKEIDFSMIINAIFTNDADINTNIIRDVRIPRALAAALVGGFLAVAGA IMQGITRNPIAEPSVMGITQGATFMIAVAFVLQRIYPNLVINSFALMIFAFLGASISGLLVYFISSRASRKVDPVKLALA GTALGTLLISLAMGISMYFNLSQQLSFWVSGGLVSAKWEGVILLALIGGIAFIGAMIMSPRITILSLGEEVAIGLGQKTN LVRFISIMIVICLTGASVSVAGNIVFVGLIIPQICKGIVGSDYRYIIPSSMILGAVLLVYSDILARIINPPYETPIGSLT ALLGVPVFIYLVRKGGK
Specific function: Part of the ABC transporter complex fhuBGCD involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790741, Length=282, Percent_Identity=34.0425531914894, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1786805, Length=310, Percent_Identity=33.5483870967742, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI1790740, Length=317, Percent_Identity=31.8611987381703, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1788004, Length=298, Percent_Identity=36.241610738255, Blast_Score=128, Evalue=5e-31, Organism=Escherichia coli, GI1786347, Length=343, Percent_Identity=29.7376093294461, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1786804, Length=333, Percent_Identity=27.9279279279279, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 35715; Mature: 35715
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGRKRTLAYGLMFIGLLLLLSGIILSISIGAKEIDFSMIINAIFTNDADINTNIIRDV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH RIPRALAAALVGGFLAVAGAIMQGITRNPIAEPSVMGITQGATFMIAVAFVLQRIYPNLV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH INSFALMIFAFLGASISGLLVYFISSRASRKVDPVKLALAGTALGTLLISLAMGISMYFN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LSQQLSFWVSGGLVSAKWEGVILLALIGGIAFIGAMIMSPRITILSLGEEVAIGLGQKTN HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCHH LVRFISIMIVICLTGASVSVAGNIVFVGLIIPQICKGIVGSDYRYIIPSSMILGAVLLVY HHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHH SDILARIINPPYETPIGSLTALLGVPVFIYLVRKGGK HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIGRKRTLAYGLMFIGLLLLLSGIILSISIGAKEIDFSMIINAIFTNDADINTNIIRDV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH RIPRALAAALVGGFLAVAGAIMQGITRNPIAEPSVMGITQGATFMIAVAFVLQRIYPNLV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH INSFALMIFAFLGASISGLLVYFISSRASRKVDPVKLALAGTALGTLLISLAMGISMYFN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LSQQLSFWVSGGLVSAKWEGVILLALIGGIAFIGAMIMSPRITILSLGEEVAIGLGQKTN HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCHH LVRFISIMIVICLTGASVSVAGNIVFVGLIIPQICKGIVGSDYRYIIPSSMILGAVLLVY HHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHH SDILARIINPPYETPIGSLTALLGVPVFIYLVRKGGK HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377; 8388528 [H]