Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is fhuD [H]

Identifier: 18309792

GI number: 18309792

Start: 994044

End: 994988

Strand: Direct

Name: fhuD [H]

Synonym: CPE0810

Alternate gene names: 18309792

Gene position: 994044-994988 (Clockwise)

Preceding gene: 18309790

Following gene: 18309793

Centisome position: 32.79

GC content: 32.17

Gene sequence:

>945_bases
ATGAAAGGACTTAAAAAATTAGCGATTTTAGGGATCGCAACACTTACGGTTGGAATGTTTGTAGGATGTTCTAATAGTAA
AACTAGTGAAGAGGGCAACACTAGTAATGAAAAAAGGATTGTTCAATCTGTAAAAGGAGAAGTTGAGATACCAGCTAATC
CTAAAAAGATAGTAGATATTTCAGGAAGTTCAGAAGAGTTAGTTTTATTAGGACATACTCCTGTAGCTACGGCAAATGTA
GACTCATATAAAACTGATCAAGTACCAGCATATATGGCTGAGACGTTAAAAGATACAAAAATAGTTGGTCATTCTATGAT
GGATACTGCTGATATAGAAGGGATATTATCAGTAGAGCCAGACTTAATAATAATGTCACCTAGACAAGAGAAAATATATG
ATCAATTAGCAGAAATAGCTCCAACAGTTATAATTAATGATAATGCAAATGATTGGGAAGCTAAGTTTAAAGAGATAGCA
AAATTATTTGATCAAGAAGAGGAAGCACAAAATTGGTTAGATAATTATTATAAAAAAGCAAAAGAAGTTGGAGAGGAAAT
AAAGAAAGCAAATGGTGATGGAACTTATTTATCTGTTTTAGCTTCTTCAGGTCAATTCATGGTATTTACTGAAGGTGGAA
TAGGCACAATTTTAAAGAGTGATATGGGATTACCTCAACCAAGTAAAATGCCAGAACAAGATAGCATAACATTACCTACA
GTTACACTTGAAGGACTTACTGAAATAGATGCAGATCATATTATAGTTTTAGGAACAGAATCAGATAAAGCTGATTTAGA
GTCAAATAGTGTTTGGAATGAAATGAGAGCTGTTAAGAATGGAAATGTAACAATACTTGATGTAAGTCCATATTTTAGCC
AAGCTTATAACCCAATGGGAAGAGAACTTTTATTAGAGTCAATAAAAAATGAACTTGTAAAATAA

Upstream 100 bases:

>100_bases
TAGGAAAAATCTGATGATATAATAAATCATGTTTATATGAAAATGATTATCATTGATGAGGGTCGAGGGTAATCTAATAA
GGAAATTAGGAGGACTAAAG

Downstream 100 bases:

>100_bases
TTAAAATTTTTAGTAGGGGCTGTATCAAAATATAAGGATACAGCCCCACTATTTAAGTTAAAATAGAAATTTTGGTGATA
CTTTAAGGAGGACAACTTAT

Product: iron(III) dicitrate ABC transporter

Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKGLKKLAILGIATLTVGMFVGCSNSKTSEEGNTSNEKRIVQSVKGEVEIPANPKKIVDISGSSEELVLLGHTPVATANV
DSYKTDQVPAYMAETLKDTKIVGHSMMDTADIEGILSVEPDLIIMSPRQEKIYDQLAEIAPTVIINDNANDWEAKFKEIA
KLFDQEEEAQNWLDNYYKKAKEVGEEIKKANGDGTYLSVLASSGQFMVFTEGGIGTILKSDMGLPQPSKMPEQDSITLPT
VTLEGLTEIDADHIIVLGTESDKADLESNSVWNEMRAVKNGNVTILDVSPYFSQAYNPMGRELLLESIKNELVK

Sequences:

>Translated_314_residues
MKGLKKLAILGIATLTVGMFVGCSNSKTSEEGNTSNEKRIVQSVKGEVEIPANPKKIVDISGSSEELVLLGHTPVATANV
DSYKTDQVPAYMAETLKDTKIVGHSMMDTADIEGILSVEPDLIIMSPRQEKIYDQLAEIAPTVIINDNANDWEAKFKEIA
KLFDQEEEAQNWLDNYYKKAKEVGEEIKKANGDGTYLSVLASSGQFMVFTEGGIGTILKSDMGLPQPSKMPEQDSITLPT
VTLEGLTEIDADHIIVLGTESDKADLESNSVWNEMRAVKNGNVTILDVSPYFSQAYNPMGRELLLESIKNELVK
>Mature_314_residues
MKGLKKLAILGIATLTVGMFVGCSNSKTSEEGNTSNEKRIVQSVKGEVEIPANPKKIVDISGSSEELVLLGHTPVATANV
DSYKTDQVPAYMAETLKDTKIVGHSMMDTADIEGILSVEPDLIIMSPRQEKIYDQLAEIAPTVIINDNANDWEAKFKEIA
KLFDQEEEAQNWLDNYYKKAKEVGEEIKKANGDGTYLSVLASSGQFMVFTEGGIGTILKSDMGLPQPSKMPEQDSITLPT
VTLEGLTEIDADHIIVLGTESDKADLESNSVWNEMRAVKNGNVTILDVSPYFSQAYNPMGRELLLESIKNELVK

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 34363; Mature: 34363

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLKKLAILGIATLTVGMFVGCSNSKTSEEGNTSNEKRIVQSVKGEVEIPANPKKIVDI
CCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCEEEEE
SGSSEELVLLGHTPVATANVDSYKTDQVPAYMAETLKDTKIVGHSMMDTADIEGILSVEP
CCCCCCEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCEEEECCC
DLIIMSPRQEKIYDQLAEIAPTVIINDNANDWEAKFKEIAKLFDQEEEAQNWLDNYYKKA
CEEEECCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KEVGEEIKKANGDGTYLSVLASSGQFMVFTEGGIGTILKSDMGLPQPSKMPEQDSITLPT
HHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCEEECE
VTLEGLTEIDADHIIVLGTESDKADLESNSVWNEMRAVKNGNVTILDVSPYFSQAYNPMG
EEECCHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCH
RELLLESIKNELVK
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKGLKKLAILGIATLTVGMFVGCSNSKTSEEGNTSNEKRIVQSVKGEVEIPANPKKIVDI
CCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCEEEEE
SGSSEELVLLGHTPVATANVDSYKTDQVPAYMAETLKDTKIVGHSMMDTADIEGILSVEP
CCCCCCEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCEEEECCC
DLIIMSPRQEKIYDQLAEIAPTVIINDNANDWEAKFKEIAKLFDQEEEAQNWLDNYYKKA
CEEEECCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KEVGEEIKKANGDGTYLSVLASSGQFMVFTEGGIGTILKSDMGLPQPSKMPEQDSITLPT
HHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCEEECE
VTLEGLTEIDADHIIVLGTESDKADLESNSVWNEMRAVKNGNVTILDVSPYFSQAYNPMG
EEECCHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCH
RELLLESIKNELVK
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]

Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]