| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is fhuD [H]
Identifier: 18309792
GI number: 18309792
Start: 994044
End: 994988
Strand: Direct
Name: fhuD [H]
Synonym: CPE0810
Alternate gene names: 18309792
Gene position: 994044-994988 (Clockwise)
Preceding gene: 18309790
Following gene: 18309793
Centisome position: 32.79
GC content: 32.17
Gene sequence:
>945_bases ATGAAAGGACTTAAAAAATTAGCGATTTTAGGGATCGCAACACTTACGGTTGGAATGTTTGTAGGATGTTCTAATAGTAA AACTAGTGAAGAGGGCAACACTAGTAATGAAAAAAGGATTGTTCAATCTGTAAAAGGAGAAGTTGAGATACCAGCTAATC CTAAAAAGATAGTAGATATTTCAGGAAGTTCAGAAGAGTTAGTTTTATTAGGACATACTCCTGTAGCTACGGCAAATGTA GACTCATATAAAACTGATCAAGTACCAGCATATATGGCTGAGACGTTAAAAGATACAAAAATAGTTGGTCATTCTATGAT GGATACTGCTGATATAGAAGGGATATTATCAGTAGAGCCAGACTTAATAATAATGTCACCTAGACAAGAGAAAATATATG ATCAATTAGCAGAAATAGCTCCAACAGTTATAATTAATGATAATGCAAATGATTGGGAAGCTAAGTTTAAAGAGATAGCA AAATTATTTGATCAAGAAGAGGAAGCACAAAATTGGTTAGATAATTATTATAAAAAAGCAAAAGAAGTTGGAGAGGAAAT AAAGAAAGCAAATGGTGATGGAACTTATTTATCTGTTTTAGCTTCTTCAGGTCAATTCATGGTATTTACTGAAGGTGGAA TAGGCACAATTTTAAAGAGTGATATGGGATTACCTCAACCAAGTAAAATGCCAGAACAAGATAGCATAACATTACCTACA GTTACACTTGAAGGACTTACTGAAATAGATGCAGATCATATTATAGTTTTAGGAACAGAATCAGATAAAGCTGATTTAGA GTCAAATAGTGTTTGGAATGAAATGAGAGCTGTTAAGAATGGAAATGTAACAATACTTGATGTAAGTCCATATTTTAGCC AAGCTTATAACCCAATGGGAAGAGAACTTTTATTAGAGTCAATAAAAAATGAACTTGTAAAATAA
Upstream 100 bases:
>100_bases TAGGAAAAATCTGATGATATAATAAATCATGTTTATATGAAAATGATTATCATTGATGAGGGTCGAGGGTAATCTAATAA GGAAATTAGGAGGACTAAAG
Downstream 100 bases:
>100_bases TTAAAATTTTTAGTAGGGGCTGTATCAAAATATAAGGATACAGCCCCACTATTTAAGTTAAAATAGAAATTTTGGTGATA CTTTAAGGAGGACAACTTAT
Product: iron(III) dicitrate ABC transporter
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MKGLKKLAILGIATLTVGMFVGCSNSKTSEEGNTSNEKRIVQSVKGEVEIPANPKKIVDISGSSEELVLLGHTPVATANV DSYKTDQVPAYMAETLKDTKIVGHSMMDTADIEGILSVEPDLIIMSPRQEKIYDQLAEIAPTVIINDNANDWEAKFKEIA KLFDQEEEAQNWLDNYYKKAKEVGEEIKKANGDGTYLSVLASSGQFMVFTEGGIGTILKSDMGLPQPSKMPEQDSITLPT VTLEGLTEIDADHIIVLGTESDKADLESNSVWNEMRAVKNGNVTILDVSPYFSQAYNPMGRELLLESIKNELVK
Sequences:
>Translated_314_residues MKGLKKLAILGIATLTVGMFVGCSNSKTSEEGNTSNEKRIVQSVKGEVEIPANPKKIVDISGSSEELVLLGHTPVATANV DSYKTDQVPAYMAETLKDTKIVGHSMMDTADIEGILSVEPDLIIMSPRQEKIYDQLAEIAPTVIINDNANDWEAKFKEIA KLFDQEEEAQNWLDNYYKKAKEVGEEIKKANGDGTYLSVLASSGQFMVFTEGGIGTILKSDMGLPQPSKMPEQDSITLPT VTLEGLTEIDADHIIVLGTESDKADLESNSVWNEMRAVKNGNVTILDVSPYFSQAYNPMGRELLLESIKNELVK >Mature_314_residues MKGLKKLAILGIATLTVGMFVGCSNSKTSEEGNTSNEKRIVQSVKGEVEIPANPKKIVDISGSSEELVLLGHTPVATANV DSYKTDQVPAYMAETLKDTKIVGHSMMDTADIEGILSVEPDLIIMSPRQEKIYDQLAEIAPTVIINDNANDWEAKFKEIA KLFDQEEEAQNWLDNYYKKAKEVGEEIKKANGDGTYLSVLASSGQFMVFTEGGIGTILKSDMGLPQPSKMPEQDSITLPT VTLEGLTEIDADHIIVLGTESDKADLESNSVWNEMRAVKNGNVTILDVSPYFSQAYNPMGRELLLESIKNELVK
Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 34363; Mature: 34363
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLKKLAILGIATLTVGMFVGCSNSKTSEEGNTSNEKRIVQSVKGEVEIPANPKKIVDI CCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCEEEEE SGSSEELVLLGHTPVATANVDSYKTDQVPAYMAETLKDTKIVGHSMMDTADIEGILSVEP CCCCCCEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCEEEECCC DLIIMSPRQEKIYDQLAEIAPTVIINDNANDWEAKFKEIAKLFDQEEEAQNWLDNYYKKA CEEEECCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KEVGEEIKKANGDGTYLSVLASSGQFMVFTEGGIGTILKSDMGLPQPSKMPEQDSITLPT HHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCEEECE VTLEGLTEIDADHIIVLGTESDKADLESNSVWNEMRAVKNGNVTILDVSPYFSQAYNPMG EEECCHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCH RELLLESIKNELVK HHHHHHHHHHHHCC >Mature Secondary Structure MKGLKKLAILGIATLTVGMFVGCSNSKTSEEGNTSNEKRIVQSVKGEVEIPANPKKIVDI CCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHCCCEECCCCCCEEEEE SGSSEELVLLGHTPVATANVDSYKTDQVPAYMAETLKDTKIVGHSMMDTADIEGILSVEP CCCCCCEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCCEEEECCC DLIIMSPRQEKIYDQLAEIAPTVIINDNANDWEAKFKEIAKLFDQEEEAQNWLDNYYKKA CEEEECCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KEVGEEIKKANGDGTYLSVLASSGQFMVFTEGGIGTILKSDMGLPQPSKMPEQDSITLPT HHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCEEECE VTLEGLTEIDADHIIVLGTESDKADLESNSVWNEMRAVKNGNVTILDVSPYFSQAYNPMG EEECCHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCH RELLLESIKNELVK HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]