Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309790

Identifier: 18309790

GI number: 18309790

Start: 992576

End: 993121

Strand: Direct

Name: 18309790

Synonym: CPE0808

Alternate gene names: NA

Gene position: 992576-993121 (Clockwise)

Preceding gene: 18309788

Following gene: 18309792

Centisome position: 32.74

GC content: 23.26

Gene sequence:

>546_bases
ATGAAAAAATTTATTACAATTTTATCAGTTATTATATGTCTAGGATTAGGAGGCTTATTAATAGCTAATCATTATACAAG
TTTAAAAGAAGAAAGGTTTAATAATATTATAGAAAATGCTAATAAAGCTATTGAAAATAAAGAATATAAGACAGCAGAGG
TATTATTAGAAAAAGCTAAACTTATGAACAATAAGACCAATGTAATATGTAAAAAGATACAGAATTTAGAGTTTCATAAA
GAACAGCAGGAACTTTATGATCAAGGATTAAGATTAGAAAAAATGAAAAGGTATTCAGAAGCTATAGATGTTTTTAGTGA
AATTCAGGATGATTCAAATGATTTAAAAATAAATAGTCATAAAGAAATAGAAGTTTGTAAAAAATGTATAATAGATGATT
TTTCAAATAAAGCAGATAAGGCTATAAGAAGAGGAGATATAGAAAGAGCAAAGTATATTATAGCTAAAATTGAAAAAGTA
GATAGTGAAAGTCCAGAAATAAATATATTAAATATGAAAATAGAGAATTTTAAATCAGCCAAATAA

Upstream 100 bases:

>100_bases
GTATATAAATATTTCTTTATATACAAACGTTTTCATAGATGTTATAATGAAGATGAATAAAATGTAAATGTATTTTGTAG
CTTTAAAGGTGGAGATTTGC

Downstream 100 bases:

>100_bases
ATATCAAGAGTACTCTTGATATTTATTTGGCTGATTTTTTTAAACAATATCTTTTGTATCTAGAAAAGCTTCTTGCAGAA
GTAATTTAATCATAGCAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKKFITILSVIICLGLGGLLIANHYTSLKEERFNNIIENANKAIENKEYKTAEVLLEKAKLMNNKTNVICKKIQNLEFHK
EQQELYDQGLRLEKMKRYSEAIDVFSEIQDDSNDLKINSHKEIEVCKKCIIDDFSNKADKAIRRGDIERAKYIIAKIEKV
DSESPEINILNMKIENFKSAK

Sequences:

>Translated_181_residues
MKKFITILSVIICLGLGGLLIANHYTSLKEERFNNIIENANKAIENKEYKTAEVLLEKAKLMNNKTNVICKKIQNLEFHK
EQQELYDQGLRLEKMKRYSEAIDVFSEIQDDSNDLKINSHKEIEVCKKCIIDDFSNKADKAIRRGDIERAKYIIAKIEKV
DSESPEINILNMKIENFKSAK
>Mature_181_residues
MKKFITILSVIICLGLGGLLIANHYTSLKEERFNNIIENANKAIENKEYKTAEVLLEKAKLMNNKTNVICKKIQNLEFHK
EQQELYDQGLRLEKMKRYSEAIDVFSEIQDDSNDLKINSHKEIEVCKKCIIDDFSNKADKAIRRGDIERAKYIIAKIEKV
DSESPEINILNMKIENFKSAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20983; Mature: 20983

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFITILSVIICLGLGGLLIANHYTSLKEERFNNIIENANKAIENKEYKTAEVLLEKAK
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LMNNKTNVICKKIQNLEFHKEQQELYDQGLRLEKMKRYSEAIDVFSEIQDDSNDLKINSH
HHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCC
KEIEVCKKCIIDDFSNKADKAIRRGDIERAKYIIAKIEKVDSESPEINILNMKIENFKSA
CHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
K
C
>Mature Secondary Structure
MKKFITILSVIICLGLGGLLIANHYTSLKEERFNNIIENANKAIENKEYKTAEVLLEKAK
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LMNNKTNVICKKIQNLEFHKEQQELYDQGLRLEKMKRYSEAIDVFSEIQDDSNDLKINSH
HHCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCC
KEIEVCKKCIIDDFSNKADKAIRRGDIERAKYIIAKIEKVDSESPEINILNMKIENFKSA
CHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA