| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is apbA [C]
Identifier: 18309768
GI number: 18309768
Start: 970747
End: 971673
Strand: Direct
Name: apbA [C]
Synonym: CPE0786
Alternate gene names: 18309768
Gene position: 970747-971673 (Clockwise)
Preceding gene: 18309767
Following gene: 18309769
Centisome position: 32.02
GC content: 31.5
Gene sequence:
>927_bases ATGAAAATCGCAATTGTTGGAGCAGGAGCAATGGGCTCACGTTATGGATATATGTTACATGAAGCTGGAAATGAAGTTAT GCTAATAGATGGGTGGAAGGATCATGTAGATACTATAAACAAAGAGGGATTAACTGTTGAGGAAAATGGAGAAATTAAAA AAGTAAAGATACCAGCAATGCTACCTCAAGATGCTAAAGAAATTCCAGAGTTAATAATATTATTTACTAAATCTATGGGA TTAGAATCAATGTTAGAATCTATAAAAGGTATATTAGGAAAAAATACAAAGGTATTATGCCTATTAAATGGATTAGGACA TAATGAAACTGTAGCAAAATATGTTGATAGCAAAAACATACTTATGGGAGTAACTTTATGGACAGCTGGGTTAAAAGGTC CAGGACATGTTGTATTAACAGGAAGCGGAAGCCTAGAAGTTCAAAATATTGATCCAAGTATGGAAAAAGAGGCAAAAGAA ATTTGTGATATATTAAGTAATGCTGGATTAAAAGCTCACTATAGTGAAAATGTATTATTTTCAATATGGCGTAAAGCTTG CGTAAATGGAACTTTAAATAGTGGATGTACAATTTTAGATTGTAATATTAAAGAATTTGGTGAATTAAAAGAAGCTCCAG AGCTTATACGTAATATCATAAAAGAATTTGCTGATGTTGCATCTAAATATGGAGTAAAGTTAGATGTTGAAGAGGTTGCA AGGGGAATAGAGGCAATATATGATCCAAGCCAAGCTGGCGCTCACTATCCATCAATGCATCAAGATTTAATACAAAATCA TCGTCTTACAGAAATAGATTATATAAATGGTTATGTATCAAGAAAAGGTAAAGAGTTTAATATAAATACACCATATAATG ACTTACTTACTACTCTTGTCATGCAAAAGAGCATACTTATTAAATAA
Upstream 100 bases:
>100_bases TTATTGAATGGTTCTGTAGAAAAGTTATACATTTATATGATGAAAATATTTTTAAATATATTTAATTTACAAAAAAGATA ATAGAGGAGAGTTGATTTAA
Downstream 100 bases:
>100_bases GAATATACAATAAATATAGTTTTTTTAAAGTTGATTTTTATGTTTTATAGAAATCAACTTTTTATATTTTATAATTTAAC TTGGTATAAATACTTATTTT
Product: 2-dehydropantoate 2-reductase
Products: NA
Alternate protein names: Ketopantoate reductase; KPA reductase; KPR [H]
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MKIAIVGAGAMGSRYGYMLHEAGNEVMLIDGWKDHVDTINKEGLTVEENGEIKKVKIPAMLPQDAKEIPELIILFTKSMG LESMLESIKGILGKNTKVLCLLNGLGHNETVAKYVDSKNILMGVTLWTAGLKGPGHVVLTGSGSLEVQNIDPSMEKEAKE ICDILSNAGLKAHYSENVLFSIWRKACVNGTLNSGCTILDCNIKEFGELKEAPELIRNIIKEFADVASKYGVKLDVEEVA RGIEAIYDPSQAGAHYPSMHQDLIQNHRLTEIDYINGYVSRKGKEFNINTPYNDLLTTLVMQKSILIK
Sequences:
>Translated_308_residues MKIAIVGAGAMGSRYGYMLHEAGNEVMLIDGWKDHVDTINKEGLTVEENGEIKKVKIPAMLPQDAKEIPELIILFTKSMG LESMLESIKGILGKNTKVLCLLNGLGHNETVAKYVDSKNILMGVTLWTAGLKGPGHVVLTGSGSLEVQNIDPSMEKEAKE ICDILSNAGLKAHYSENVLFSIWRKACVNGTLNSGCTILDCNIKEFGELKEAPELIRNIIKEFADVASKYGVKLDVEEVA RGIEAIYDPSQAGAHYPSMHQDLIQNHRLTEIDYINGYVSRKGKEFNINTPYNDLLTTLVMQKSILIK >Mature_308_residues MKIAIVGAGAMGSRYGYMLHEAGNEVMLIDGWKDHVDTINKEGLTVEENGEIKKVKIPAMLPQDAKEIPELIILFTKSMG LESMLESIKGILGKNTKVLCLLNGLGHNETVAKYVDSKNILMGVTLWTAGLKGPGHVVLTGSGSLEVQNIDPSMEKEAKE ICDILSNAGLKAHYSENVLFSIWRKACVNGTLNSGCTILDCNIKEFGELKEAPELIRNIIKEFADVASKYGVKLDVEEVA RGIEAIYDPSQAGAHYPSMHQDLIQNHRLTEIDYINGYVSRKGKEFNINTPYNDLLTTLVMQKSILIK
Specific function: Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid [H]
COG id: COG1893
COG function: function code H; Ketopantoate reductase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketopantoate reductase family [H]
Homologues:
Organism=Escherichia coli, GI1786627, Length=305, Percent_Identity=27.8688524590164, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR003710 - InterPro: IPR013752 - InterPro: IPR013332 - InterPro: IPR013328 - InterPro: IPR016040 [H]
Pfam domain/function: PF02558 ApbA; PF08546 ApbA_C [H]
EC number: =1.1.1.169 [H]
Molecular weight: Translated: 33907; Mature: 33907
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIVGAGAMGSRYGYMLHEAGNEVMLIDGWKDHVDTINKEGLTVEENGEIKKVKIPAM CEEEEEECCCCCCCCCEEEEECCCEEEEEECCHHHHHHHCCCCCEEECCCCEEEEEECCC LPQDAKEIPELIILFTKSMGLESMLESIKGILGKNTKVLCLLNGLGHNETVAKYVDSKNI CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCE LMGVTLWTAGLKGPGHVVLTGSGSLEVQNIDPSMEKEAKEICDILSNAGLKAHYSENVLF EEEEEEEECCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCHHHH SIWRKACVNGTLNSGCTILDCNIKEFGELKEAPELIRNIIKEFADVASKYGVKLDVEEVA HHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHH RGIEAIYDPSQAGAHYPSMHQDLIQNHRLTEIDYINGYVSRKGKEFNINTPYNDLLTTLV HHHHHHCCCHHCCCCCCHHHHHHHHCCCCCEEHHHHHHHHCCCCEEECCCCHHHHHHHHH MQKSILIK HHHHHHCC >Mature Secondary Structure MKIAIVGAGAMGSRYGYMLHEAGNEVMLIDGWKDHVDTINKEGLTVEENGEIKKVKIPAM CEEEEEECCCCCCCCCEEEEECCCEEEEEECCHHHHHHHCCCCCEEECCCCEEEEEECCC LPQDAKEIPELIILFTKSMGLESMLESIKGILGKNTKVLCLLNGLGHNETVAKYVDSKNI CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCE LMGVTLWTAGLKGPGHVVLTGSGSLEVQNIDPSMEKEAKEICDILSNAGLKAHYSENVLF EEEEEEEECCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCHHHH SIWRKACVNGTLNSGCTILDCNIKEFGELKEAPELIRNIIKEFADVASKYGVKLDVEEVA HHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHH RGIEAIYDPSQAGAHYPSMHQDLIQNHRLTEIDYINGYVSRKGKEFNINTPYNDLLTTLV HHHHHHCCCHHCCCCCCHHHHHHHHCCCCCEEHHHHHHHHCCCCEEECCCCHHHHHHHHH MQKSILIK HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]