| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309688
Identifier: 18309688
GI number: 18309688
Start: 879423
End: 880265
Strand: Direct
Name: 18309688
Synonym: CPE0706
Alternate gene names: NA
Gene position: 879423-880265 (Clockwise)
Preceding gene: 18309687
Following gene: 18309689
Centisome position: 29.01
GC content: 22.54
Gene sequence:
>843_bases ATGGTTAAAATTAATAAAAAAGTAATTTGGATATTTGTGATTATTGGAATTATATTTGTGGGAATTAGTTCTACTGATTT AGTTGAAGAAAATGAAACTATAAGTTTTCCTTATGAGTTTGAGGTTGATAATTACAACATTGAAATTGAGTATTCTAAGC TTTATGATAATTATTTGTTGACTAAATATAAGATATGGAGAAAAGATGGTTCTTATATAGGGGAAAATGAAGCAAATTTA TCTACATTCATAACTAAATATGATAGTGCGTTTAGTTTTGGACCACATATTATTTCATCAAAAGTAATTGATAATAAAAT TAAAGAAGAAATAAGTATAGATTTTGTTGCTGCAATAGAAAAGCCCTTAGAAAAAGTGAAAATTAGACATGCCTTAGCTG GAAAGTATATTGATGGAACTAAAGAGATTAAAAAAGAAGGAGTTGTTAATTTAAGTAATGAAAATTATATACGTTTAAAT AAAAAAATTAAAATAGATGATATAAATTTAACTGTTAGTAATTTAGGAAATTTTGAATTTGGATCTATTTTAAATTTATT TACTGAAAACTTAGAAGATGAAGAAGTTGAAAATTTTCATGAAAATTATAGTATTAAATTAAAATCAAATGATTTTAGTA AAATATATGAAATTAAGCAAATGATGATTCTTCGTGGCAAAGCTGCAGAGGAAGTTATTAAATGGAATAAATTAAATAAG GATACTAAGCTTATAGAATTTTTTATAGTTGACTTATTATATGATGTAGATTCAATTGATTTTAATAATTTTGAGCTTTT TGTTGTTAATAAAAATACCAATGAAGAAACAAAAATTTATTAA
Upstream 100 bases:
>100_bases AGTTAATACTTTATTCTTGATTTGAATAAAGTATTAACTTTTTTTATTTGGTATTTATGGGTTTTATTAGGATGATAAAA TAGAAAAAAGGAGATTGAAA
Downstream 100 bases:
>100_bases GTAGTTAAAAAGTAATACTTTAGTCCTATATTATTTAATATGTTTAAAAATAGTGTGAAAAATGGTAATATTTTATGTAA CAGTAAATTTTAACATGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MVKINKKVIWIFVIIGIIFVGISSTDLVEENETISFPYEFEVDNYNIEIEYSKLYDNYLLTKYKIWRKDGSYIGENEANL STFITKYDSAFSFGPHIISSKVIDNKIKEEISIDFVAAIEKPLEKVKIRHALAGKYIDGTKEIKKEGVVNLSNENYIRLN KKIKIDDINLTVSNLGNFEFGSILNLFTENLEDEEVENFHENYSIKLKSNDFSKIYEIKQMMILRGKAAEEVIKWNKLNK DTKLIEFFIVDLLYDVDSIDFNNFELFVVNKNTNEETKIY
Sequences:
>Translated_280_residues MVKINKKVIWIFVIIGIIFVGISSTDLVEENETISFPYEFEVDNYNIEIEYSKLYDNYLLTKYKIWRKDGSYIGENEANL STFITKYDSAFSFGPHIISSKVIDNKIKEEISIDFVAAIEKPLEKVKIRHALAGKYIDGTKEIKKEGVVNLSNENYIRLN KKIKIDDINLTVSNLGNFEFGSILNLFTENLEDEEVENFHENYSIKLKSNDFSKIYEIKQMMILRGKAAEEVIKWNKLNK DTKLIEFFIVDLLYDVDSIDFNNFELFVVNKNTNEETKIY >Mature_280_residues MVKINKKVIWIFVIIGIIFVGISSTDLVEENETISFPYEFEVDNYNIEIEYSKLYDNYLLTKYKIWRKDGSYIGENEANL STFITKYDSAFSFGPHIISSKVIDNKIKEEISIDFVAAIEKPLEKVKIRHALAGKYIDGTKEIKKEGVVNLSNENYIRLN KKIKIDDINLTVSNLGNFEFGSILNLFTENLEDEEVENFHENYSIKLKSNDFSKIYEIKQMMILRGKAAEEVIKWNKLNK DTKLIEFFIVDLLYDVDSIDFNNFELFVVNKNTNEETKIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32709; Mature: 32709
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKINKKVIWIFVIIGIIFVGISSTDLVEENETISFPYEFEVDNYNIEIEYSKLYDNYLL CEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEEECCEEEEEEEHHHHCCHHH TKYKIWRKDGSYIGENEANLSTFITKYDSAFSFGPHIISSKVIDNKIKEEISIDFVAAIE EEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KPLEKVKIRHALAGKYIDGTKEIKKEGVVNLSNENYIRLNKKIKIDDINLTVSNLGNFEF HHHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCCEEEECCEEEEEEEEEEEECCCCCCH GSILNLFTENLEDEEVENFHENYSIKLKSNDFSKIYEIKQMMILRGKAAEEVIKWNKLNK HHHHHHHHCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCC DTKLIEFFIVDLLYDVDSIDFNNFELFVVNKNTNEETKIY HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MVKINKKVIWIFVIIGIIFVGISSTDLVEENETISFPYEFEVDNYNIEIEYSKLYDNYLL CEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEEECCEEEEEEEHHHHCCHHH TKYKIWRKDGSYIGENEANLSTFITKYDSAFSFGPHIISSKVIDNKIKEEISIDFVAAIE EEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KPLEKVKIRHALAGKYIDGTKEIKKEGVVNLSNENYIRLNKKIKIDDINLTVSNLGNFEF HHHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCCCEEEECCEEEEEEEEEEEECCCCCCH GSILNLFTENLEDEEVENFHENYSIKLKSNDFSKIYEIKQMMILRGKAAEEVIKWNKLNK HHHHHHHHCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCC DTKLIEFFIVDLLYDVDSIDFNNFELFVVNKNTNEETKIY HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA