| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309687
Identifier: 18309687
GI number: 18309687
Start: 878354
End: 879211
Strand: Direct
Name: 18309687
Synonym: CPE0705
Alternate gene names: NA
Gene position: 878354-879211 (Clockwise)
Preceding gene: 18309686
Following gene: 18309688
Centisome position: 28.97
GC content: 23.89
Gene sequence:
>858_bases ATGAGAGAGATAGATAATTATATTGACTCTTTATATAAGAATATTGATGGAATTTCAAAAGAAAATAAAGAGATAAAGGA AACTATGAGGACTCATTTAATAGAATCTGTAGAAGAATTAAAATTAGAAGGATTTAGTGAAAAAGAGAGTATTAAGATTG CTTTAGAACGATTTGGAGAAATAAATGAAATTAGAGGAGAACTAAAAACTGTAGTGGAAAGAGGGGTAAAACCACTACTA TATACAGTGGGAATTTCATTAATAATACTTATAGCTTTCTTTACCCATTTAATATTTATGAGATTTGATTATATAAAATT GCTAGCTTTAATAATTATTGCTGTTCCAATGTATATAATAATTAGAGGTGGAGTTTTAATATATTATAAAGTAAAGGGTA TAAAATATGATATAGATTGGAAAAAGGAATTATATAAATTTTTATTTGCTAATTATTTTATATTTCTAGTTGGGTGGTAT ATATTCCCTATAGAAGTTGGAGGAAGCTCAAATGTTAATTTTCAAGTAGACTTAATTCCTTTTAAAAGTTATATTGAATT AATGAATAGGGGAATAACTATAGGATATCTTATGAAATGGATAATTATCAGATTGATTTTATTTATACCTTTAGGATTTT ATCCAGCATTTCTAAAAGGAAAATTTAATAATATAGCTGGCTGTGTACTAATAGCTTCTATAGTTTATTTTATAGTTCCT ATATTAGAATTAATATTAAGTTTTGGATTAATTTCTGTACCAATAATTTATATTGGAATAGATTATTGGGTGATAAGTAT AATTGGAGTTTTACTTGGTTATTTTTTATATAATTCAATAGCTAAAAAACATATTTAA
Upstream 100 bases:
>100_bases TTTAAAATTACAGAGGATGGAGTTAATTATCTAAAAGAAAAAAAGAGTGAATGGGAATTTCTAAAGAGTATTATGAATAT TTTTTTGGGGGGAGAATAAA
Downstream 100 bases:
>100_bases ATTTTTAATAGAGCGTATTTAAATAAAAAGTAAGACTAAATATGTATTAGTAATTTTAGATATAAATTAAAATAGATTAG AGAAAATTAAAAAGTTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MREIDNYIDSLYKNIDGISKENKEIKETMRTHLIESVEELKLEGFSEKESIKIALERFGEINEIRGELKTVVERGVKPLL YTVGISLIILIAFFTHLIFMRFDYIKLLALIIIAVPMYIIIRGGVLIYYKVKGIKYDIDWKKELYKFLFANYFIFLVGWY IFPIEVGGSSNVNFQVDLIPFKSYIELMNRGITIGYLMKWIIIRLILFIPLGFYPAFLKGKFNNIAGCVLIASIVYFIVP ILELILSFGLISVPIIYIGIDYWVISIIGVLLGYFLYNSIAKKHI
Sequences:
>Translated_285_residues MREIDNYIDSLYKNIDGISKENKEIKETMRTHLIESVEELKLEGFSEKESIKIALERFGEINEIRGELKTVVERGVKPLL YTVGISLIILIAFFTHLIFMRFDYIKLLALIIIAVPMYIIIRGGVLIYYKVKGIKYDIDWKKELYKFLFANYFIFLVGWY IFPIEVGGSSNVNFQVDLIPFKSYIELMNRGITIGYLMKWIIIRLILFIPLGFYPAFLKGKFNNIAGCVLIASIVYFIVP ILELILSFGLISVPIIYIGIDYWVISIIGVLLGYFLYNSIAKKHI >Mature_285_residues MREIDNYIDSLYKNIDGISKENKEIKETMRTHLIESVEELKLEGFSEKESIKIALERFGEINEIRGELKTVVERGVKPLL YTVGISLIILIAFFTHLIFMRFDYIKLLALIIIAVPMYIIIRGGVLIYYKVKGIKYDIDWKKELYKFLFANYFIFLVGWY IFPIEVGGSSNVNFQVDLIPFKSYIELMNRGITIGYLMKWIIIRLILFIPLGFYPAFLKGKFNNIAGCVLIASIVYFIVP ILELILSFGLISVPIIYIGIDYWVISIIGVLLGYFLYNSIAKKHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33048; Mature: 33048
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREIDNYIDSLYKNIDGISKENKEIKETMRTHLIESVEELKLEGFSEKESIKIALERFGE CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC INEIRGELKTVVERGVKPLLYTVGISLIILIAFFTHLIFMRFDYIKLLALIIIAVPMYII HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRGGVLIYYKVKGIKYDIDWKKELYKFLFANYFIFLVGWYIFPIEVGGSSNVNFQVDLIP HHCCEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEC FKSYIELMNRGITIGYLMKWIIIRLILFIPLGFYPAFLKGKFNNIAGCVLIASIVYFIVP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ILELILSFGLISVPIIYIGIDYWVISIIGVLLGYFLYNSIAKKHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MREIDNYIDSLYKNIDGISKENKEIKETMRTHLIESVEELKLEGFSEKESIKIALERFGE CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC INEIRGELKTVVERGVKPLLYTVGISLIILIAFFTHLIFMRFDYIKLLALIIIAVPMYII HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRGGVLIYYKVKGIKYDIDWKKELYKFLFANYFIFLVGWYIFPIEVGGSSNVNFQVDLIP HHCCEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEC FKSYIELMNRGITIGYLMKWIIIRLILFIPLGFYPAFLKGKFNNIAGCVLIASIVYFIVP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ILELILSFGLISVPIIYIGIDYWVISIIGVLLGYFLYNSIAKKHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA