Click here to switch to the map view.

The map label for this gene is X [H]

Identifier: 18309686

GI number: 18309686

Start: 878020

End: 878352

Strand: Direct

Name: X [H]

Synonym: CPE0704

Alternate gene names: 18309686

Gene position: 878020-878352 (Clockwise)

Preceding gene: 18309685

Following gene: 18309687

Centisome position: 28.96

GC content: 27.93

Gene sequence:

>333_bases
TTGGAACTTAATAAAGAGATTATAAAAGGACATGTGGAAAGTATAATATTATCACTTTTACAAGAAAAAGATTTATATGG
GTATGAGATTTCAAAATTAATTAGAGAAAACAGTAAAGAAGCCTTTGAGGTCAAGGATGGAACCTTATATGTTGTTTTAA
AAAGGTTAGAAAAATTAGGACTTGTAATATCATACTGGGGTGATTGTAAAAGTGGTGGTGGAAGAAGAAAATATTTTAAA
ATTACAGAGGATGGAGTTAATTATCTAAAAGAAAAAAAGAGTGAATGGGAATTTCTAAAGAGTATTATGAATATTTTTTT
GGGGGGAGAATAA

Upstream 100 bases:

>100_bases
AGAATACAGCTTTTTTTTATTATGTTTTTGTGAATTATACCATAAAGTATTCTATACTATAGAGTACTTTGTGGTATAAT
TATACTTGGGAGGGATAATA

Downstream 100 bases:

>100_bases
AATGAGAGAGATAGATAATTATATTGACTCTTTATATAAGAATATTGATGGAATTTCAAAAGAAAATAAAGAGATAAAGG
AAACTATGAGGACTCATTTA

Product: 30S ribosomal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MELNKEIIKGHVESIILSLLQEKDLYGYEISKLIRENSKEAFEVKDGTLYVVLKRLEKLGLVISYWGDCKSGGGRRKYFK
ITEDGVNYLKEKKSEWEFLKSIMNIFLGGE

Sequences:

>Translated_110_residues
MELNKEIIKGHVESIILSLLQEKDLYGYEISKLIRENSKEAFEVKDGTLYVVLKRLEKLGLVISYWGDCKSGGGRRKYFK
ITEDGVNYLKEKKSEWEFLKSIMNIFLGGE
>Mature_110_residues
MELNKEIIKGHVESIILSLLQEKDLYGYEISKLIRENSKEAFEVKDGTLYVVLKRLEKLGLVISYWGDCKSGGGRRKYFK
ITEDGVNYLKEKKSEWEFLKSIMNIFLGGE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12769; Mature: 12769

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELNKEIIKGHVESIILSLLQEKDLYGYEISKLIRENSKEAFEVKDGTLYVVLKRLEKLG
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHC
LVISYWGDCKSGGGRRKYFKITEDGVNYLKEKKSEWEFLKSIMNIFLGGE
HHHEECCCCCCCCCCCEEEEECHHHHHHHHHCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MELNKEIIKGHVESIILSLLQEKDLYGYEISKLIRENSKEAFEVKDGTLYVVLKRLEKLG
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHC
LVISYWGDCKSGGGRRKYFKITEDGVNYLKEKKSEWEFLKSIMNIFLGGE
HHHEECCCCCCCCCCCEEEEECHHHHHHHHHCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA