| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is aroA [H]
Identifier: 18309678
GI number: 18309678
Start: 871378
End: 872652
Strand: Direct
Name: aroA [H]
Synonym: CPE0696
Alternate gene names: 18309678
Gene position: 871378-872652 (Clockwise)
Preceding gene: 18309677
Following gene: 161485643
Centisome position: 28.74
GC content: 28.63
Gene sequence:
>1275_bases GTGAAAAAGGTAATTATAACTCCTAGTAAGTTAAGGGGAAGTGTAAAAATACCACCTTCTAAAAGTATGGCTCATAGAGC TATTATTTGTGCTTCTTTAAGCAAAGGAGAAAGTGTTATTTCTAACATAGATTTTTCAGAAGATATTATTGCAACTATGG AAGGTATGAAATCTTTAGGAGCAAATATAAAAGTAGAAAAAGATAAACTAATTATAAATGGAGAAAATATTTTAAAGGAT TCTAATTATAAATTTATTGATTGTAATGAATCAGGTTCCACTTTAAGATTTTTAGTTCCAATTTCCTTAATAAAAGATAA TAGAGTTAATTTTATCGGTAGAGGAAATTTAGGGAAAAGACCATTAAAAACTTATTATGAGATTTTTGAGGAGCAAGAAA TTAAGTATTCCTATGAGGAAGAAAATCTTGATTTGAATATAGAAGGAAGCTTAAAAGGTGGAGAATTCAAAGTTAAGGGA AATATAAGTTCTCAATTTATAAGTGGTTTATTATTTACTCTTCCTTTATTAAAAGATGATTCTAAAATAATAATAACTAC AGAACTTGAATCTAAAGGATATATAGATTTAACTTTAGACATGATAGAAAAGTTTGGAGTTACAATAAAAAATAATAATT ATAGAGAATTTTTAATAAAAGGTAATCAAAGTTATAAGCCTATGAATTATAAGGTTGAAGGTGATTACTCACAGGCTGCT TTCTATTTTTCAGCAGGGGCCTTAGGCTCAGAAATAAATTGTCTTGATTTAGATTTAAGTTCTTATCAAGGAGATAAGGA ATGCATTGAAATATTAGAGGGTATGGGTGCTAGGCTTATAGAAAGTCAAGAAAGGTCTTTAAGTATAATTCATGGGGATT TAAATGGAACAATTATAGATGCTTCACAATGCCCAGATATAATTCCTGTTTTGACAGTGGTTGCTGCTTTAAGTAAGGGA GAGACTAGGATTATAAATGGAGAAAGACTTAGAATAAAAGAATGTGATAGATTAAATGCTATATGTACAGAGCTTAATAA ACTAGGTGCAGATATAAAGGAATTAAAAGATGGACTTATAATAAATGGAGTTAAAGATTTAATAGGAGGAGAAGTATATA GCCATAAAGATCATAGAATAGCTATGAGTTTGGCTATTGCTTCTACAAGATGCAAGAAAGAGGTTATTATAAAAGAACCA GATTGTGTTAAAAAATCTTATCCAGGATTTTGGGAAGATTTTAAGAGCTTAGGTGGAATTTTAAGAGAAGAATAA
Upstream 100 bases:
>100_bases TTAGAAAGGCTTTAGGGTTATATATGAAATTAATATGGGTTTAAAACAGAGGATAAAATTTATAGTGTAATTTGAAAATA AGTATAGGGAGCGGGTAAAA
Downstream 100 bases:
>100_bases TATATAGAATATTCAACAGAAGGGAGGAAGCTTTTAGAGATAATAAGCTTTAAAAGCAAATAAATGGGAGGAGTTTGGGG TAATAAAATAAAATTATCTA
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MKKVIITPSKLRGSVKIPPSKSMAHRAIICASLSKGESVISNIDFSEDIIATMEGMKSLGANIKVEKDKLIINGENILKD SNYKFIDCNESGSTLRFLVPISLIKDNRVNFIGRGNLGKRPLKTYYEIFEEQEIKYSYEEENLDLNIEGSLKGGEFKVKG NISSQFISGLLFTLPLLKDDSKIIITTELESKGYIDLTLDMIEKFGVTIKNNNYREFLIKGNQSYKPMNYKVEGDYSQAA FYFSAGALGSEINCLDLDLSSYQGDKECIEILEGMGARLIESQERSLSIIHGDLNGTIIDASQCPDIIPVLTVVAALSKG ETRIINGERLRIKECDRLNAICTELNKLGADIKELKDGLIINGVKDLIGGEVYSHKDHRIAMSLAIASTRCKKEVIIKEP DCVKKSYPGFWEDFKSLGGILREE
Sequences:
>Translated_424_residues MKKVIITPSKLRGSVKIPPSKSMAHRAIICASLSKGESVISNIDFSEDIIATMEGMKSLGANIKVEKDKLIINGENILKD SNYKFIDCNESGSTLRFLVPISLIKDNRVNFIGRGNLGKRPLKTYYEIFEEQEIKYSYEEENLDLNIEGSLKGGEFKVKG NISSQFISGLLFTLPLLKDDSKIIITTELESKGYIDLTLDMIEKFGVTIKNNNYREFLIKGNQSYKPMNYKVEGDYSQAA FYFSAGALGSEINCLDLDLSSYQGDKECIEILEGMGARLIESQERSLSIIHGDLNGTIIDASQCPDIIPVLTVVAALSKG ETRIINGERLRIKECDRLNAICTELNKLGADIKELKDGLIINGVKDLIGGEVYSHKDHRIAMSLAIASTRCKKEVIIKEP DCVKKSYPGFWEDFKSLGGILREE >Mature_424_residues MKKVIITPSKLRGSVKIPPSKSMAHRAIICASLSKGESVISNIDFSEDIIATMEGMKSLGANIKVEKDKLIINGENILKD SNYKFIDCNESGSTLRFLVPISLIKDNRVNFIGRGNLGKRPLKTYYEIFEEQEIKYSYEEENLDLNIEGSLKGGEFKVKG NISSQFISGLLFTLPLLKDDSKIIITTELESKGYIDLTLDMIEKFGVTIKNNNYREFLIKGNQSYKPMNYKVEGDYSQAA FYFSAGALGSEINCLDLDLSSYQGDKECIEILEGMGARLIESQERSLSIIHGDLNGTIIDASQCPDIIPVLTVVAALSKG ETRIINGERLRIKECDRLNAICTELNKLGADIKELKDGLIINGVKDLIGGEVYSHKDHRIAMSLAIASTRCKKEVIIKEP DCVKKSYPGFWEDFKSLGGILREE
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=426, Percent_Identity=31.6901408450704, Blast_Score=222, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6320332, Length=466, Percent_Identity=27.4678111587983, Blast_Score=147, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 47211; Mature: 47211
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVIITPSKLRGSVKIPPSKSMAHRAIICASLSKGESVISNIDFSEDIIATMEGMKSLG CCEEEECHHHCCCCEECCCCHHHHHHEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHC ANIKVEKDKLIINGENILKDSNYKFIDCNESGSTLRFLVPISLIKDNRVNFIGRGNLGKR CCEEEECCEEEECCCHHEECCCEEEEEECCCCCEEEEEEEEEEECCCCEEEEECCCCCCC PLKTYYEIFEEQEIKYSYEEENLDLNIEGSLKGGEFKVKGNISSQFISGLLFTLPLLKDD HHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCC SKIIITTELESKGYIDLTLDMIEKFGVTIKNNNYREFLIKGNQSYKPMNYKVEGDYSQAA CEEEEEEEECCCCEEEEEHHHHHHCCCEEECCCEEEEEEECCCCCCCCEEEECCCCCCEE FYFSAGALGSEINCLDLDLSSYQGDKECIEILEGMGARLIESQERSLSIIHGDLNGTIID EEEECCCCCCCCEEEEEEHHHCCCCHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCEEEE ASQCPDIIPVLTVVAALSKGETRIINGERLRIKECDRLNAICTELNKLGADIKELKDGLI HHCCCCHHHHHHHHHHHCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHCCEE INGVKDLIGGEVYSHKDHRIAMSLAIASTRCKKEVIIKEPDCVKKSYPGFWEDFKSLGGI EECHHHHHCCCEECCCCCEEEEEEEHHHHCCCCCEEECCCCHHHCCCCCHHHHHHHHHHH LREE HCCC >Mature Secondary Structure MKKVIITPSKLRGSVKIPPSKSMAHRAIICASLSKGESVISNIDFSEDIIATMEGMKSLG CCEEEECHHHCCCCEECCCCHHHHHHEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHC ANIKVEKDKLIINGENILKDSNYKFIDCNESGSTLRFLVPISLIKDNRVNFIGRGNLGKR CCEEEECCEEEECCCHHEECCCEEEEEECCCCCEEEEEEEEEEECCCCEEEEECCCCCCC PLKTYYEIFEEQEIKYSYEEENLDLNIEGSLKGGEFKVKGNISSQFISGLLFTLPLLKDD HHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCC SKIIITTELESKGYIDLTLDMIEKFGVTIKNNNYREFLIKGNQSYKPMNYKVEGDYSQAA CEEEEEEEECCCCEEEEEHHHHHHCCCEEECCCEEEEEEECCCCCCCCEEEECCCCCCEE FYFSAGALGSEINCLDLDLSSYQGDKECIEILEGMGARLIESQERSLSIIHGDLNGTIID EEEECCCCCCCCEEEEEEHHHCCCCHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCEEEE ASQCPDIIPVLTVVAALSKGETRIINGERLRIKECDRLNAICTELNKLGADIKELKDGLI HHCCCCHHHHHHHHHHHCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHCCEE INGVKDLIGGEVYSHKDHRIAMSLAIASTRCKKEVIIKEPDCVKKSYPGFWEDFKSLGGI EECHHHHHCCCEECCCCCEEEEEEEHHHHCCCCCEEECCCCHHHCCCCCHHHHHHHHHHH LREE HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA