Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is 18309651

Identifier: 18309651

GI number: 18309651

Start: 832865

End: 833872

Strand: Direct

Name: 18309651

Synonym: CPE0669

Alternate gene names: NA

Gene position: 832865-833872 (Clockwise)

Preceding gene: 18309650

Following gene: 18309654

Centisome position: 27.47

GC content: 25.2

Gene sequence:

>1008_bases
ATGGCACATAAAAAGGTGGCAAAAATAATAGCAACTGCTATAGTAGTAAATAACCTCTCCAGTAGCGTAGTTTTAGGCAA
AGAAGTAAATTTAATAGAGAAAAACAAAGATAATTCAGTTATAAATCAAAATATAAGTCATAGTAAAAGATATAATAATA
TTTTTAGAATAGAAAAAACAGTAGGAAATACAGAGGAATTCTTAAAAATAATAAATGATGGGAACTTAGAAGAAATAAAA
TTATCGAGGGATATTGACCTTAGCAATTTAATTTCTAGTGGAGTAGATATTAAGAGTTCAAATGTTGTAATAGATGGTCA
AGGATATAGTATCTATGTTCCTAAATTAGCTGAAAATCTTAATAGAGATTTTTTTACACTACAGGGAGATGGGATTGTGC
TAAAAAATTTAAATATAGTGTGTAAGGATAATGAAGATTTAAACAATAATAACCTTATTACTATATCAGGAGATGACATA
ACTTTAGAAAATGTTTTCATAGAATCTAACTTTAATAGAGCAGTAAACATTTTAGAGGGAAATAATATTCATATTAATGA
TTGTAAAATAGTAAATAATCAAGAAAAGGGTAATGGATTAAAGGTTGAAAATGGAATAGTAACCTTAAATAATCTTGATT
TACAAAATAAATCTGGAGTTGGACTTGACATTTTAGGAAAAGATTCAAAGGTTTATTTAAAAGGAGATATAAAAATAAAT
TCTCCAATTGAAATAAGGGGGCAATTTAGAGATGGTGGAATTTTAAATTGTGACAACAATCAGTTAATCCACGAAAAAAG
AGTCTTTGGATATACTTATTATAATGTTGCAAAGGAAACAGAGTTAGTTAGAAATAAAGATGAGTTTTTAGAAGCAATAG
ATAATAATATAGTTAAAAATATAAAATTAATGGACAATATTGATTTAAGAGGACATGAATCAGAATATTATAAAGTTTTT
GAAAAAGAAATAAAGGTTGATAAAAATAATTATCATATAACAATGTAA

Upstream 100 bases:

>100_bases
TCAAAAAAATCTATAATTTATTTTTGAAAACCTATACAAAAAATGATATAATTAGTTCATAATAGAAATATAAAAAATAA
TAAGAAGAGGTGAGTTTAGT

Downstream 100 bases:

>100_bases
AGTTTAAAGGTATCTAAACGGAGTCAAATCTCAGCGTTTAGATACCTTTTATAGTATAATATATAATTTGCTATTTAAAA
GTGTTAATTATTAAGATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MAHKKVAKIIATAIVVNNLSSSVVLGKEVNLIEKNKDNSVINQNISHSKRYNNIFRIEKTVGNTEEFLKIINDGNLEEIK
LSRDIDLSNLISSGVDIKSSNVVIDGQGYSIYVPKLAENLNRDFFTLQGDGIVLKNLNIVCKDNEDLNNNNLITISGDDI
TLENVFIESNFNRAVNILEGNNIHINDCKIVNNQEKGNGLKVENGIVTLNNLDLQNKSGVGLDILGKDSKVYLKGDIKIN
SPIEIRGQFRDGGILNCDNNQLIHEKRVFGYTYYNVAKETELVRNKDEFLEAIDNNIVKNIKLMDNIDLRGHESEYYKVF
EKEIKVDKNNYHITM

Sequences:

>Translated_335_residues
MAHKKVAKIIATAIVVNNLSSSVVLGKEVNLIEKNKDNSVINQNISHSKRYNNIFRIEKTVGNTEEFLKIINDGNLEEIK
LSRDIDLSNLISSGVDIKSSNVVIDGQGYSIYVPKLAENLNRDFFTLQGDGIVLKNLNIVCKDNEDLNNNNLITISGDDI
TLENVFIESNFNRAVNILEGNNIHINDCKIVNNQEKGNGLKVENGIVTLNNLDLQNKSGVGLDILGKDSKVYLKGDIKIN
SPIEIRGQFRDGGILNCDNNQLIHEKRVFGYTYYNVAKETELVRNKDEFLEAIDNNIVKNIKLMDNIDLRGHESEYYKVF
EKEIKVDKNNYHITM
>Mature_334_residues
AHKKVAKIIATAIVVNNLSSSVVLGKEVNLIEKNKDNSVINQNISHSKRYNNIFRIEKTVGNTEEFLKIINDGNLEEIKL
SRDIDLSNLISSGVDIKSSNVVIDGQGYSIYVPKLAENLNRDFFTLQGDGIVLKNLNIVCKDNEDLNNNNLITISGDDIT
LENVFIESNFNRAVNILEGNNIHINDCKIVNNQEKGNGLKVENGIVTLNNLDLQNKSGVGLDILGKDSKVYLKGDIKINS
PIEIRGQFRDGGILNCDNNQLIHEKRVFGYTYYNVAKETELVRNKDEFLEAIDNNIVKNIKLMDNIDLRGHESEYYKVFE
KEIKVDKNNYHITM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37813; Mature: 37682

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHKKVAKIIATAIVVNNLSSSVVLGKEVNLIEKNKDNSVINQNISHSKRYNNIFRIEKT
CCHHHHHHHHHHHHHHHCCCCCEEECCEEEEEECCCCCCHHCCCCCHHHHCCCEEEEEEC
VGNTEEFLKIINDGNLEEIKLSRDIDLSNLISSGVDIKSSNVVIDGQGYSIYVPKLAENL
CCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCEECCCEEEECCCCEEECCHHHHHC
NRDFFTLQGDGIVLKNLNIVCKDNEDLNNNNLITISGDDITLENVFIESNFNRAVNILEG
CCCEEEEECCCEEEECCEEEECCCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEEEEEC
NNIHINDCKIVNNQEKGNGLKVENGIVTLNNLDLQNKSGVGLDILGKDSKVYLKGDIKIN
CEEEEEEEEEECCCCCCCCEEEECCEEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEEC
SPIEIRGQFRDGGILNCDNNQLIHEKRVFGYTYYNVAKETELVRNKDEFLEAIDNNIVKN
CCEEEEEEECCCCEEECCCCCEEEEHEEEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHE
IKLMDNIDLRGHESEYYKVFEKEIKVDKNNYHITM
EEEEECCCCCCCCHHHHHHHHHHHEECCCCEEEEC
>Mature Secondary Structure 
AHKKVAKIIATAIVVNNLSSSVVLGKEVNLIEKNKDNSVINQNISHSKRYNNIFRIEKT
CHHHHHHHHHHHHHHHCCCCCEEECCEEEEEECCCCCCHHCCCCCHHHHCCCEEEEEEC
VGNTEEFLKIINDGNLEEIKLSRDIDLSNLISSGVDIKSSNVVIDGQGYSIYVPKLAENL
CCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCEECCCEEEECCCCEEECCHHHHHC
NRDFFTLQGDGIVLKNLNIVCKDNEDLNNNNLITISGDDITLENVFIESNFNRAVNILEG
CCCEEEEECCCEEEECCEEEECCCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEEEEEC
NNIHINDCKIVNNQEKGNGLKVENGIVTLNNLDLQNKSGVGLDILGKDSKVYLKGDIKIN
CEEEEEEEEEECCCCCCCCEEEECCEEEEECCCCCCCCCCCEEEECCCCEEEEEEEEEEC
SPIEIRGQFRDGGILNCDNNQLIHEKRVFGYTYYNVAKETELVRNKDEFLEAIDNNIVKN
CCEEEEEEECCCCEEECCCCCEEEEHEEEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHE
IKLMDNIDLRGHESEYYKVFEKEIKVDKNNYHITM
EEEEECCCCCCCCHHHHHHHHHHHEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA