Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309654

Identifier: 18309654

GI number: 18309654

Start: 838095

End: 838457

Strand: Direct

Name: 18309654

Synonym: CPE0672

Alternate gene names: NA

Gene position: 838095-838457 (Clockwise)

Preceding gene: 18309651

Following gene: 18309655

Centisome position: 27.65

GC content: 23.97

Gene sequence:

>363_bases
ATGGAAAAAGACATAAAAATTAATGAGGGTTTAATTTCAACTTGTAATGATGATTATTTAAATGCTGTGTCTTTAGTAAA
AGAAAAATTAAATATATACTTAGAGGAACCTAAAGTGTTTTCAAATGAATATGTTTTAGGAACACCAGGGTTTAAAGACA
ATTTAAGAGATAATTTAAAGAGAGCATTGGCAATAATTTTTGATTTTGTTGCAGTTTATAAAAAATACGAAGTAAATGAA
AACATAAAAAGCATCTTAGAAAAGGCTAGAAATATTTATTCTATCTTAGAAGAAGCACAAGGAAATATTAATGAGGATGT
TTTAAAATCATTAAAAGAAATTAGAGCAATAGAATTTAAATAA

Upstream 100 bases:

>100_bases
AATTAGAATCCAAAATTTTTTATATAAATAAAAAAACCACACAAACACTATAATTAATTATCTTTAAAGAACTAATGAAA
GAGTTAAGGAGATGATTTAA

Downstream 100 bases:

>100_bases
TTTTTATGGAAAGGTTAGTAACATTAAAAGTTGCTAGCCTTTTTTTATATAGAAAATTATTTTGAGATTTATATTGTAGA
CTTAAATATTAAAAAAGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MEKDIKINEGLISTCNDDYLNAVSLVKEKLNIYLEEPKVFSNEYVLGTPGFKDNLRDNLKRALAIIFDFVAVYKKYEVNE
NIKSILEKARNIYSILEEAQGNINEDVLKSLKEIRAIEFK

Sequences:

>Translated_120_residues
MEKDIKINEGLISTCNDDYLNAVSLVKEKLNIYLEEPKVFSNEYVLGTPGFKDNLRDNLKRALAIIFDFVAVYKKYEVNE
NIKSILEKARNIYSILEEAQGNINEDVLKSLKEIRAIEFK
>Mature_120_residues
MEKDIKINEGLISTCNDDYLNAVSLVKEKLNIYLEEPKVFSNEYVLGTPGFKDNLRDNLKRALAIIFDFVAVYKKYEVNE
NIKSILEKARNIYSILEEAQGNINEDVLKSLKEIRAIEFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13877; Mature: 13877

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKDIKINEGLISTCNDDYLNAVSLVKEKLNIYLEEPKVFSNEYVLGTPGFKDNLRDNLK
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHH
RALAIIFDFVAVYKKYEVNENIKSILEKARNIYSILEEAQGNINEDVLKSLKEIRAIEFK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKDIKINEGLISTCNDDYLNAVSLVKEKLNIYLEEPKVFSNEYVLGTPGFKDNLRDNLK
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHH
RALAIIFDFVAVYKKYEVNENIKSILEKARNIYSILEEAQGNINEDVLKSLKEIRAIEFK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA