Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309648

Identifier: 18309648

GI number: 18309648

Start: 831185

End: 831457

Strand: Direct

Name: 18309648

Synonym: CPE0666

Alternate gene names: NA

Gene position: 831185-831457 (Clockwise)

Preceding gene: 18309647

Following gene: 18309649

Centisome position: 27.42

GC content: 28.57

Gene sequence:

>273_bases
ATTGCCACGACATATGCTAAAAGCATAAACTGTCTAACACTTGCAAATAAGTTATATTTTTGTTTAAAATATTTGACATA
TGTTAAGTTAAATAATAATATAATTAAAGCGTTAAAGGGAGTATCTGCAAGGTTACTGTTCTTGAAACATCCTGAAATTA
AAAGATATCTATGTGGAGGAAACCTATGGAATCCAAGCTATTTTGTAGCTACTGTATCAGAGAATACAGAAGAACAAATT
AGAAACTATATTCAAAATCAACAAGTAAAGTGA

Upstream 100 bases:

>100_bases
TGGAGGAGAATATGGTATTAGAGGTACTTGAAGAATTTGGGAAAATTCTTTAAACTTTATGCCTTTGGCAAGAACACTCG
TAATTTCAATCATGGGATGA

Downstream 100 bases:

>100_bases
GGTGAGATAAGTGATAAGAAAGAAAGCATATAAATTTAGAATATATCCAACTAAGAAACAAGCCGAGCTAATTAACAAGA
CTATTGGATGTTGTAGGTTT

Product: transposase

Products: NA

Alternate protein names: ISCpe2 Transposase OrfA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MATTYAKSINCLTLANKLYFCLKYLTYVKLNNNIIKALKGVSARLLFLKHPEIKRYLCGGNLWNPSYFVATVSENTEEQI
RNYIQNQQVK

Sequences:

>Translated_90_residues
MATTYAKSINCLTLANKLYFCLKYLTYVKLNNNIIKALKGVSARLLFLKHPEIKRYLCGGNLWNPSYFVATVSENTEEQI
RNYIQNQQVK
>Mature_89_residues
ATTYAKSINCLTLANKLYFCLKYLTYVKLNNNIIKALKGVSARLLFLKHPEIKRYLCGGNLWNPSYFVATVSENTEEQIR
NYIQNQQVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10437; Mature: 10306

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTYAKSINCLTLANKLYFCLKYLTYVKLNNNIIKALKGVSARLLFLKHPEIKRYLCGG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCHHHHCCCC
NLWNPSYFVATVSENTEEQIRNYIQNQQVK
CCCCCCEEEEECCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
ATTYAKSINCLTLANKLYFCLKYLTYVKLNNNIIKALKGVSARLLFLKHPEIKRYLCGG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCHHHHCCCC
NLWNPSYFVATVSENTEEQIRNYIQNQQVK
CCCCCCEEEEECCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA