Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309649

Identifier: 18309649

GI number: 18309649

Start: 831468

End: 831821

Strand: Direct

Name: 18309649

Synonym: CPE0667

Alternate gene names: NA

Gene position: 831468-831821 (Clockwise)

Preceding gene: 18309648

Following gene: 18309650

Centisome position: 27.43

GC content: 31.64

Gene sequence:

>354_bases
GTGATAAGAAAGAAAGCATATAAATTTAGAATATATCCAACTAAGAAACAAGCCGAGCTAATTAACAAGACTATTGGATG
TTGTAGGTTTGTATTCAACTATTCTTTAGGTGTTCAAAAAACTAAAGATAATTATTGGAATATAGTTGAGGAGATGGTTC
AACAAGGCTACTTCCAAGAGAATAATTGGAAAGGCGAGTTCTTTAATAAAGCCAATTCAATTAAAGATATAGCTAAATTA
AAGAAAAGCTATGATTGGCTTAAAGAAGTAGATAGCATAGCACTACAGGCTTCTGTTGAAAATCTTGGTGCTGGATATGA
TAAGTATTACAAAAAAAACAGGTGGCAGACCTAA

Upstream 100 bases:

>100_bases
CTATGGAATCCAAGCTATTTTGTAGCTACTGTATCAGAGAATACAGAAGAACAAATTAGAAACTATATTCAAAATCAACA
AGTAAAGTGAGGTGAGATAA

Downstream 100 bases:

>100_bases
ATTTAAGTCTAAGAAAAATGAAATACAATCTTATACTACTAAATTAGTAAAAGCTAAAGGTAATGTAAATATTGAGATAG
TAGGTAAAGGAATTAAACTA

Product: transposase

Products: NA

Alternate protein names: Transposase For Insertion Sequence Element; Amidase; Transposase-Like Protein B; ISCpe2 Transposase OrfB; Transposase OrfB Family; Transposase OrfB For Insertion Sequence Element

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MIRKKAYKFRIYPTKKQAELINKTIGCCRFVFNYSLGVQKTKDNYWNIVEEMVQQGYFQENNWKGEFFNKANSIKDIAKL
KKSYDWLKEVDSIALQASVENLGAGYDKYYKKNRWQT

Sequences:

>Translated_117_residues
MIRKKAYKFRIYPTKKQAELINKTIGCCRFVFNYSLGVQKTKDNYWNIVEEMVQQGYFQENNWKGEFFNKANSIKDIAKL
KKSYDWLKEVDSIALQASVENLGAGYDKYYKKNRWQT
>Mature_117_residues
MIRKKAYKFRIYPTKKQAELINKTIGCCRFVFNYSLGVQKTKDNYWNIVEEMVQQGYFQENNWKGEFFNKANSIKDIAKL
KKSYDWLKEVDSIALQASVENLGAGYDKYYKKNRWQT

Specific function: Unknown

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13988; Mature: 13988

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKKAYKFRIYPTKKQAELINKTIGCCRFVFNYSLGVQKTKDNYWNIVEEMVQQGYFQE
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
NNWKGEFFNKANSIKDIAKLKKSYDWLKEVDSIALQASVENLGAGYDKYYKKNRWQT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
>Mature Secondary Structure
MIRKKAYKFRIYPTKKQAELINKTIGCCRFVFNYSLGVQKTKDNYWNIVEEMVQQGYFQE
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
NNWKGEFFNKANSIKDIAKLKKSYDWLKEVDSIALQASVENLGAGYDKYYKKNRWQT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA