| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309647
Identifier: 18309647
GI number: 18309647
Start: 830406
End: 831137
Strand: Direct
Name: 18309647
Synonym: CPE0665
Alternate gene names: NA
Gene position: 830406-831137 (Clockwise)
Preceding gene: 18309643
Following gene: 18309648
Centisome position: 27.39
GC content: 28.42
Gene sequence:
>732_bases ATGGTACCATATAACATAGATTATTGTGAAGAAAAAATAAAAGAATATAAAAATAAAATAAAAGAGAATAAAAAAGGTGA TTTCATTATTAGATATAGTGAGGGAAAAGAATTTAATGGCTATTTATATGAACATAAGCAGTCATTAAAAGAAAGTCCTA TAGAACTATATGAAGGAGAAAAGCTTTGGATGAGAATTTCACCGCATGAGATTCAAGGAGCTTTTGAAGGGATAAAAAGA GCAAAAGGTAAGGTTGGGGTTCTAGGATTAGGATTAGGATACTTTGTTCAGGAAATAGCAAAAAGTGATCAAGTAAGAGA AATAGTTGTCTATGAAATGAGTGAAGAAATAATTGACTTATACTTAGAAAACTTTGGAGAAAATCCTAAGATAAGAATAG TAAAAGGAGATGGGTTTAAAGCTAAGAGAGAAAACTTTGACTTTTTCTATGTGGATATATATGAATATAAATTAACTACT AAAGTTGTTGAAGACTATGTTAAATTAACAAAACTTCATGATATTGTAGAATATAGCTTTTTTGGAGTAGAGTCCTTTAT ATTAAGTTGTCCAACTAGTGAAATAATATGGGTTTATATATTAGAAGAGTGGATGGATATGTCAAAGGACTTATTTACAA GATTTAATCACAGTGAGTATATTGAATATTTTTCACCTATGGAGGAGAATATGGTATTAGAGGTACTTGAAGAATTTGGG AAAATTCTTTAA
Upstream 100 bases:
>100_bases AGTAAGTACTTTTATTAATGTAGTTTTTAATAATATATCTAAAAGAAATATAGACTAATAAAAATGAATTGTTTTCTGAG AAGATTAGAAAGGAAAAAGT
Downstream 100 bases:
>100_bases ACTTTATGCCTTTGGCAAGAACACTCGTAATTTCAATCATGGGATGAATTGCCACGACATATGCTAAAAGCATAAACTGT CTAACACTTGCAAATAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MVPYNIDYCEEKIKEYKNKIKENKKGDFIIRYSEGKEFNGYLYEHKQSLKESPIELYEGEKLWMRISPHEIQGAFEGIKR AKGKVGVLGLGLGYFVQEIAKSDQVREIVVYEMSEEIIDLYLENFGENPKIRIVKGDGFKAKRENFDFFYVDIYEYKLTT KVVEDYVKLTKLHDIVEYSFFGVESFILSCPTSEIIWVYILEEWMDMSKDLFTRFNHSEYIEYFSPMEENMVLEVLEEFG KIL
Sequences:
>Translated_243_residues MVPYNIDYCEEKIKEYKNKIKENKKGDFIIRYSEGKEFNGYLYEHKQSLKESPIELYEGEKLWMRISPHEIQGAFEGIKR AKGKVGVLGLGLGYFVQEIAKSDQVREIVVYEMSEEIIDLYLENFGENPKIRIVKGDGFKAKRENFDFFYVDIYEYKLTT KVVEDYVKLTKLHDIVEYSFFGVESFILSCPTSEIIWVYILEEWMDMSKDLFTRFNHSEYIEYFSPMEENMVLEVLEEFG KIL >Mature_243_residues MVPYNIDYCEEKIKEYKNKIKENKKGDFIIRYSEGKEFNGYLYEHKQSLKESPIELYEGEKLWMRISPHEIQGAFEGIKR AKGKVGVLGLGLGYFVQEIAKSDQVREIVVYEMSEEIIDLYLENFGENPKIRIVKGDGFKAKRENFDFFYVDIYEYKLTT KVVEDYVKLTKLHDIVEYSFFGVESFILSCPTSEIIWVYILEEWMDMSKDLFTRFNHSEYIEYFSPMEENMVLEVLEEFG KIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28906; Mature: 28906
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPYNIDYCEEKIKEYKNKIKENKKGDFIIRYSEGKEFNGYLYEHKQSLKESPIELYEGE CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHCCCC KLWMRISPHEIQGAFEGIKRAKGKVGVLGLGLGYFVQEIAKSDQVREIVVYEMSEEIIDL EEEEEECHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHH YLENFGENPKIRIVKGDGFKAKRENFDFFYVDIYEYKLTTKVVEDYVKLTKLHDIVEYSF HHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH FGVESFILSCPTSEIIWVYILEEWMDMSKDLFTRFNHSEYIEYFSPMEENMVLEVLEEFG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH KIL CCC >Mature Secondary Structure MVPYNIDYCEEKIKEYKNKIKENKKGDFIIRYSEGKEFNGYLYEHKQSLKESPIELYEGE CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHCCCC KLWMRISPHEIQGAFEGIKRAKGKVGVLGLGLGYFVQEIAKSDQVREIVVYEMSEEIIDL EEEEEECHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHH YLENFGENPKIRIVKGDGFKAKRENFDFFYVDIYEYKLTTKVVEDYVKLTKLHDIVEYSF HHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH FGVESFILSCPTSEIIWVYILEEWMDMSKDLFTRFNHSEYIEYFSPMEENMVLEVLEEFG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH KIL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA