| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309648
Identifier: 18309648
GI number: 18309648
Start: 831185
End: 831457
Strand: Direct
Name: 18309648
Synonym: CPE0666
Alternate gene names: NA
Gene position: 831185-831457 (Clockwise)
Preceding gene: 18309647
Following gene: 18309649
Centisome position: 27.42
GC content: 28.57
Gene sequence:
>273_bases ATTGCCACGACATATGCTAAAAGCATAAACTGTCTAACACTTGCAAATAAGTTATATTTTTGTTTAAAATATTTGACATA TGTTAAGTTAAATAATAATATAATTAAAGCGTTAAAGGGAGTATCTGCAAGGTTACTGTTCTTGAAACATCCTGAAATTA AAAGATATCTATGTGGAGGAAACCTATGGAATCCAAGCTATTTTGTAGCTACTGTATCAGAGAATACAGAAGAACAAATT AGAAACTATATTCAAAATCAACAAGTAAAGTGA
Upstream 100 bases:
>100_bases TGGAGGAGAATATGGTATTAGAGGTACTTGAAGAATTTGGGAAAATTCTTTAAACTTTATGCCTTTGGCAAGAACACTCG TAATTTCAATCATGGGATGA
Downstream 100 bases:
>100_bases GGTGAGATAAGTGATAAGAAAGAAAGCATATAAATTTAGAATATATCCAACTAAGAAACAAGCCGAGCTAATTAACAAGA CTATTGGATGTTGTAGGTTT
Product: transposase
Products: NA
Alternate protein names: ISCpe2 Transposase OrfA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MATTYAKSINCLTLANKLYFCLKYLTYVKLNNNIIKALKGVSARLLFLKHPEIKRYLCGGNLWNPSYFVATVSENTEEQI RNYIQNQQVK
Sequences:
>Translated_90_residues MATTYAKSINCLTLANKLYFCLKYLTYVKLNNNIIKALKGVSARLLFLKHPEIKRYLCGGNLWNPSYFVATVSENTEEQI RNYIQNQQVK >Mature_89_residues ATTYAKSINCLTLANKLYFCLKYLTYVKLNNNIIKALKGVSARLLFLKHPEIKRYLCGGNLWNPSYFVATVSENTEEQIR NYIQNQQVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10437; Mature: 10306
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTYAKSINCLTLANKLYFCLKYLTYVKLNNNIIKALKGVSARLLFLKHPEIKRYLCGG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCHHHHCCCC NLWNPSYFVATVSENTEEQIRNYIQNQQVK CCCCCCEEEEECCCCCHHHHHHHHHCCCCC >Mature Secondary Structure ATTYAKSINCLTLANKLYFCLKYLTYVKLNNNIIKALKGVSARLLFLKHPEIKRYLCGG CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCHHHHCCCC NLWNPSYFVATVSENTEEQIRNYIQNQQVK CCCCCCEEEEECCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA