| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309639
Identifier: 18309639
GI number: 18309639
Start: 819969
End: 821306
Strand: Direct
Name: 18309639
Synonym: CPE0657
Alternate gene names: NA
Gene position: 819969-821306 (Clockwise)
Preceding gene: 18309638
Following gene: 18309640
Centisome position: 27.05
GC content: 28.85
Gene sequence:
>1338_bases ATGGATTTTGAAAGAACTAGGAGGAAACTTCTTAATATAGCAATGGAAGCTGAAGAAGAGAATAAGTCTTTAACAGATGA TTTTAAGAGAGAATTTTGGAGCTTAATAGAGAAGGTAATAATCTCTCTTTATGATAAAGAAAATTCATTTTTTGGTCAGT TTTTAATTCATGTAAAGAGAGAAATAAGAACTGATATTAAATGGCCTATAGCCACTAAACCAGAAATGGGATATTTCACA ATGGTATTTAATCCAAGCATAATATTAGAATGTGATTTAAAAGAGGTTCAGGCCCTTTTAAAGCATGAAGTATATCATAT AATGATGTCTCATTATGCTAGAGAAAAGGCTTTAAGTAGAAAATATTCAAAACTTGCTGTTAGTATAGCTATGGATATCG CCATAAATCAGTATATAAAGAATTTACCTCCATATAGTAAAAGGCTAGATTATGTGAATTTAGAATATAATCTAGAATTA AAACCAGATATGCCTATGGAAAAATATGCAGAAGAAATTCAAAAAGCAATTGAAAGAAGAAAAAAATATGGTATTACTGG TGATGATAAAAATGCTGGTGATTTAGTAAGCCAAGAAAAATCCCATGAAGTATGGGAAGAGGTTTCTATAAGCTTAGATA GTTTAGAGGGAACAACTAAGAAAACAGCCATAAATGCATATAAGGGAAAGGCTCCTAAGGATTTAGAAAAAATAATCTTA CTAATGAAAGAAAAACCAGAGATAAAGTGGAGTGAATTTTTAAAGGATATAATTCCTACAACAAGAGGAAGTTATAGAAA AACTATAACAAGAAAAGATAGACGTCTTCCAGAAAGATTAGACCTTAGAGGAAAATTGCCAAATTCTATTCCGAAAATAT TAATAGCAATAGATGTTTCAGCATCCATTTCTGATAAAGAGTTTGAAAATATAATAATAGAAGTTTTAGGTATAGTAAGA AATAAAAATGCTGAAATAAAAGTTATTGAATGTGATGATGAAATAAGAAGAGTTTATGATTTAAAAGGAATAAAAGATAT AAAGCCAAGAAGTAAGAAAAATGGCTCAACAAGATTTTCTCCAGTATTTAGATATATAAAAGAAAATAATATGAGAAATC ATATTCTTGTATATTTTACAGATGGAGTTGGAGAAAAAGATTTAGAGGTTAAGCCTATAAATTATAGAACTCTTTGGGTC TTAACAGGCAAGGAACAATTAAGTTTAAATAAATCTTTTGGAACTGTTAAACATTTAGAAAAAGAAAAAGGGGATGGATA TACCCTTATGGATGGTTTGCAAGATATGAAGGATAATCTTCATGATTGGGCTAGATAA
Upstream 100 bases:
>100_bases ATAAAAAGCGATCACTCAGAAGAATTATATAGAAATTTATTAAATGAGGATAAGTTCTTAGAAGCATTCTTTGAGATATA TAGCTAGGTGGTGAAATCTT
Downstream 100 bases:
>100_bases AGTAAAAAGATAGCACATGTTGATTTAATTGAAAATCAATATGTGCTATATTGTTTTTATATGGTTTATTAACTATAAAA AATATAACTTAATTAAATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MDFERTRRKLLNIAMEAEEENKSLTDDFKREFWSLIEKVIISLYDKENSFFGQFLIHVKREIRTDIKWPIATKPEMGYFT MVFNPSIILECDLKEVQALLKHEVYHIMMSHYAREKALSRKYSKLAVSIAMDIAINQYIKNLPPYSKRLDYVNLEYNLEL KPDMPMEKYAEEIQKAIERRKKYGITGDDKNAGDLVSQEKSHEVWEEVSISLDSLEGTTKKTAINAYKGKAPKDLEKIIL LMKEKPEIKWSEFLKDIIPTTRGSYRKTITRKDRRLPERLDLRGKLPNSIPKILIAIDVSASISDKEFENIIIEVLGIVR NKNAEIKVIECDDEIRRVYDLKGIKDIKPRSKKNGSTRFSPVFRYIKENNMRNHILVYFTDGVGEKDLEVKPINYRTLWV LTGKEQLSLNKSFGTVKHLEKEKGDGYTLMDGLQDMKDNLHDWAR
Sequences:
>Translated_445_residues MDFERTRRKLLNIAMEAEEENKSLTDDFKREFWSLIEKVIISLYDKENSFFGQFLIHVKREIRTDIKWPIATKPEMGYFT MVFNPSIILECDLKEVQALLKHEVYHIMMSHYAREKALSRKYSKLAVSIAMDIAINQYIKNLPPYSKRLDYVNLEYNLEL KPDMPMEKYAEEIQKAIERRKKYGITGDDKNAGDLVSQEKSHEVWEEVSISLDSLEGTTKKTAINAYKGKAPKDLEKIIL LMKEKPEIKWSEFLKDIIPTTRGSYRKTITRKDRRLPERLDLRGKLPNSIPKILIAIDVSASISDKEFENIIIEVLGIVR NKNAEIKVIECDDEIRRVYDLKGIKDIKPRSKKNGSTRFSPVFRYIKENNMRNHILVYFTDGVGEKDLEVKPINYRTLWV LTGKEQLSLNKSFGTVKHLEKEKGDGYTLMDGLQDMKDNLHDWAR >Mature_445_residues MDFERTRRKLLNIAMEAEEENKSLTDDFKREFWSLIEKVIISLYDKENSFFGQFLIHVKREIRTDIKWPIATKPEMGYFT MVFNPSIILECDLKEVQALLKHEVYHIMMSHYAREKALSRKYSKLAVSIAMDIAINQYIKNLPPYSKRLDYVNLEYNLEL KPDMPMEKYAEEIQKAIERRKKYGITGDDKNAGDLVSQEKSHEVWEEVSISLDSLEGTTKKTAINAYKGKAPKDLEKIIL LMKEKPEIKWSEFLKDIIPTTRGSYRKTITRKDRRLPERLDLRGKLPNSIPKILIAIDVSASISDKEFENIIIEVLGIVR NKNAEIKVIECDDEIRRVYDLKGIKDIKPRSKKNGSTRFSPVFRYIKENNMRNHILVYFTDGVGEKDLEVKPINYRTLWV LTGKEQLSLNKSFGTVKHLEKEKGDGYTLMDGLQDMKDNLHDWAR
Specific function: Unknown
COG id: COG3864
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018698 [H]
Pfam domain/function: PF09967 DUF2201 [H]
EC number: NA
Molecular weight: Translated: 52082; Mature: 52082
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFERTRRKLLNIAMEAEEENKSLTDDFKREFWSLIEKVIISLYDKENSFFGQFLIHVKR CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EIRTDIKWPIATKPEMGYFTMVFNPSIILECDLKEVQALLKHEVYHIMMSHYAREKALSR HHHCCCCCCCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYSKLAVSIAMDIAINQYIKNLPPYSKRLDYVNLEYNLELKPDMPMEKYAEEIQKAIERR HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHH KKYGITGDDKNAGDLVSQEKSHEVWEEVSISLDSLEGTTKKTAINAYKGKAPKDLEKIIL HHCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH LMKEKPEIKWSEFLKDIIPTTRGSYRKTITRKDRRLPERLDLRGKLPNSIPKILIAIDVS HHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEEECC ASISDKEFENIIIEVLGIVRNKNAEIKVIECDDEIRRVYDLKGIKDIKPRSKKNGSTRFS CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCHHH PVFRYIKENNMRNHILVYFTDGVGEKDLEVKPINYRTLWVLTGKEQLSLNKSFGTVKHLE HHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCCEEEEEEEECCHHHCCCCCHHHHHHHH KEKGDGYTLMDGLQDMKDNLHDWAR HHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDFERTRRKLLNIAMEAEEENKSLTDDFKREFWSLIEKVIISLYDKENSFFGQFLIHVKR CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EIRTDIKWPIATKPEMGYFTMVFNPSIILECDLKEVQALLKHEVYHIMMSHYAREKALSR HHHCCCCCCCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYSKLAVSIAMDIAINQYIKNLPPYSKRLDYVNLEYNLELKPDMPMEKYAEEIQKAIERR HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHH KKYGITGDDKNAGDLVSQEKSHEVWEEVSISLDSLEGTTKKTAINAYKGKAPKDLEKIIL HHCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH LMKEKPEIKWSEFLKDIIPTTRGSYRKTITRKDRRLPERLDLRGKLPNSIPKILIAIDVS HHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEEECC ASISDKEFENIIIEVLGIVRNKNAEIKVIECDDEIRRVYDLKGIKDIKPRSKKNGSTRFS CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCHHH PVFRYIKENNMRNHILVYFTDGVGEKDLEVKPINYRTLWVLTGKEQLSLNKSFGTVKHLE HHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCCEEEEEEEECCHHHCCCCCHHHHHHHH KEKGDGYTLMDGLQDMKDNLHDWAR HHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8168477; 10360571 [H]