Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309640

Identifier: 18309640

GI number: 18309640

Start: 821464

End: 822855

Strand: Direct

Name: 18309640

Synonym: CPE0658

Alternate gene names: NA

Gene position: 821464-822855 (Clockwise)

Preceding gene: 18309639

Following gene: 18309641

Centisome position: 27.1

GC content: 24.35

Gene sequence:

>1392_bases
GTGAAGAAAAATATTAAGAACATGGCTTTAGTATTATTAATAATTTTTGTGATAGCTTTAATTGTTATAACATTTAAAAT
AATTAAATTTAGAAAAAATACAGTGACAGATATAAAAGCTTGTGAAAATAAAATAACTTTTAATTCTAAGATTAAAAGAG
AAGAAATAGAGTATTTAAAAGTTGATGGAGAGAAGGATAGACAAGTAAATAAGATTGAAGGGTTAAATTTATTTATAAAT
AATAGTAAAGTTAATTTAAGTGATAAAATTTATGAAAAGAATTTAAGGTATTATATTTCTTTAGAAGATTTAGAGAAAAA
TGGACAAGTATCAATTGATGGAAATAATGTTTTAAGCAAGACAAATAAAAATTACATAGATTTAGAGAAAAAAGAGATTT
TAAAAGAAAAGGATAAATTAGATTTAAGAGGAGAAGTTTTAGATTTAGATCATAAAAAATACATTTCTATAAATGATTTT
AAAGAGCTTATTGAAGCTAGAGATGATTGGTACGAAAATAAAAACTCAATTTATATGTTTCAGGGTAAAACTAATAATAT
AAACTGCAATTATAAAGTTAATGAAGGAAAAGCTGCTTTAATAAGAATAGAGGATGTTAGTGCTGGGGGAGTTTTTTCTG
AAGATAATAATATGGAAAAAATGAAATATTTAAGTGATTATTTTAAAGCTAATAATATAGTATTTCACATAGCTTGGATA
CCTAGATACATAAACCCTGAAAAAAACATAGATAATGATTTGCTTAAAAATAATAATTTTGAAAATGTTCATTTTATAAA
TATGCTAGATCATTTAATAAATAGAGGGGCTATAATTGGTCTTCATGGATACACTCATCAACATAATAAGCAAATAAGTG
GACTTGGAGTAGAGTTAAAATGGAATGTTAATAGTAATAAAAATAAAGTTTTAAAGGTTGTTGAATCCTCATTAAAGACA
GCTAAGACCTTAAATATACCTATAGGTTTCTTTGAAAGCCCACATTATAAAGCAGATAGAAATCAGCAAAAAATAATAGA
ACAATATTTCCCAGTTATGTTTGAACCTTATGCAGGATATTGGAACTTAAATCCATTAATAAGTTTTAGTAATAAGTCTA
CATTATATGTACCTGCTCCTTTAGGATATGTTAAGGATAATGGAGAGACTGTAGCTAGAAGAATTAGAAATTATAGCAAT
GAAATTTTAACGGCATTTTTCATACATCCATATATTTTTTTAGGAAGTATAGAGAATAAAAATAATAGCACAAATAATGA
GGAAATATATGAGTTTAATGAAAATTCACCTATATTAAAGGTAATATCAGCTTTAAAAGAAAGAGGATGCAAAACCATAA
CTGTTAATGAATTAAACAATCAAATTACATAG

Upstream 100 bases:

>100_bases
TATATGGTTTATTAACTATAAAAAATATAACTTAATTAAATAGTAAATCCTTAATTAAATTTATAAGGTATATTTTAAAA
ATCCATAAAGGGGGAATTCC

Downstream 100 bases:

>100_bases
TAAAAGTTTTTATTATGTATTCTTTTAAAATACCATCTTTTACATAGATACTTTTTAAGGTTTAAATAAATTCGACTAAA
ATATAAGAATAGTAAATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MKKNIKNMALVLLIIFVIALIVITFKIIKFRKNTVTDIKACENKITFNSKIKREEIEYLKVDGEKDRQVNKIEGLNLFIN
NSKVNLSDKIYEKNLRYYISLEDLEKNGQVSIDGNNVLSKTNKNYIDLEKKEILKEKDKLDLRGEVLDLDHKKYISINDF
KELIEARDDWYENKNSIYMFQGKTNNINCNYKVNEGKAALIRIEDVSAGGVFSEDNNMEKMKYLSDYFKANNIVFHIAWI
PRYINPEKNIDNDLLKNNNFENVHFINMLDHLINRGAIIGLHGYTHQHNKQISGLGVELKWNVNSNKNKVLKVVESSLKT
AKTLNIPIGFFESPHYKADRNQQKIIEQYFPVMFEPYAGYWNLNPLISFSNKSTLYVPAPLGYVKDNGETVARRIRNYSN
EILTAFFIHPYIFLGSIENKNNSTNNEEIYEFNENSPILKVISALKERGCKTITVNELNNQIT

Sequences:

>Translated_463_residues
MKKNIKNMALVLLIIFVIALIVITFKIIKFRKNTVTDIKACENKITFNSKIKREEIEYLKVDGEKDRQVNKIEGLNLFIN
NSKVNLSDKIYEKNLRYYISLEDLEKNGQVSIDGNNVLSKTNKNYIDLEKKEILKEKDKLDLRGEVLDLDHKKYISINDF
KELIEARDDWYENKNSIYMFQGKTNNINCNYKVNEGKAALIRIEDVSAGGVFSEDNNMEKMKYLSDYFKANNIVFHIAWI
PRYINPEKNIDNDLLKNNNFENVHFINMLDHLINRGAIIGLHGYTHQHNKQISGLGVELKWNVNSNKNKVLKVVESSLKT
AKTLNIPIGFFESPHYKADRNQQKIIEQYFPVMFEPYAGYWNLNPLISFSNKSTLYVPAPLGYVKDNGETVARRIRNYSN
EILTAFFIHPYIFLGSIENKNNSTNNEEIYEFNENSPILKVISALKERGCKTITVNELNNQIT
>Mature_463_residues
MKKNIKNMALVLLIIFVIALIVITFKIIKFRKNTVTDIKACENKITFNSKIKREEIEYLKVDGEKDRQVNKIEGLNLFIN
NSKVNLSDKIYEKNLRYYISLEDLEKNGQVSIDGNNVLSKTNKNYIDLEKKEILKEKDKLDLRGEVLDLDHKKYISINDF
KELIEARDDWYENKNSIYMFQGKTNNINCNYKVNEGKAALIRIEDVSAGGVFSEDNNMEKMKYLSDYFKANNIVFHIAWI
PRYINPEKNIDNDLLKNNNFENVHFINMLDHLINRGAIIGLHGYTHQHNKQISGLGVELKWNVNSNKNKVLKVVESSLKT
AKTLNIPIGFFESPHYKADRNQQKIIEQYFPVMFEPYAGYWNLNPLISFSNKSTLYVPAPLGYVKDNGETVARRIRNYSN
EILTAFFIHPYIFLGSIENKNNSTNNEEIYEFNENSPILKVISALKERGCKTITVNELNNQIT

Specific function: Unknown

COG id: COG5298

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53809; Mature: 53809

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNIKNMALVLLIIFVIALIVITFKIIKFRKNTVTDIKACENKITFNSKIKREEIEYLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEECCCCCCCCEEEEE
VDGEKDRQVNKIEGLNLFINNSKVNLSDKIYEKNLRYYISLEDLEKNGQVSIDGNNVLSK
ECCCCCCCCHHCCCEEEEEECCEECCHHHHHHCCCEEEEEEEECCCCCEEEECCCCHHHC
TNKNYIDLEKKEILKEKDKLDLRGEVLDLDHKKYISINDFKELIEARDDWYENKNSIYMF
CCCCEECCCHHHHHHHHCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEE
QGKTNNINCNYKVNEGKAALIRIEDVSAGGVFSEDNNMEKMKYLSDYFKANNIVFHIAWI
ECCCCCEEEEEEECCCCEEEEEEEECCCCCEECCCCCHHHHHHHHHHHCCCCEEEEEEEE
PRYINPEKNIDNDLLKNNNFENVHFINMLDHLINRGAIIGLHGYTHQHNKQISGLGVELK
CCCCCCCCCCCHHHHCCCCCCCEEHHHHHHHHHCCCEEEEEECCCCCCCCEEECEEEEEE
WNVNSNKNKVLKVVESSLKTAKTLNIPIGFFESPHYKADRNQQKIIEQYFPVMFEPYAGY
ECCCCCHHHHHHHHHHHHHHHEEEECEEECCCCCCCCCCCCHHHHHHHHCCEEECCCCCE
WNLNPLISFSNKSTLYVPAPLGYVKDNGETVARRIRNYSNEILTAFFIHPYIFLGSIENK
ECCCCEEEECCCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCC
NNSTNNEEIYEFNENSPILKVISALKERGCKTITVNELNNQIT
CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure
MKKNIKNMALVLLIIFVIALIVITFKIIKFRKNTVTDIKACENKITFNSKIKREEIEYLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEECCCCCCCCEEEEE
VDGEKDRQVNKIEGLNLFINNSKVNLSDKIYEKNLRYYISLEDLEKNGQVSIDGNNVLSK
ECCCCCCCCHHCCCEEEEEECCEECCHHHHHHCCCEEEEEEEECCCCCEEEECCCCHHHC
TNKNYIDLEKKEILKEKDKLDLRGEVLDLDHKKYISINDFKELIEARDDWYENKNSIYMF
CCCCEECCCHHHHHHHHCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEE
QGKTNNINCNYKVNEGKAALIRIEDVSAGGVFSEDNNMEKMKYLSDYFKANNIVFHIAWI
ECCCCCEEEEEEECCCCEEEEEEEECCCCCEECCCCCHHHHHHHHHHHCCCCEEEEEEEE
PRYINPEKNIDNDLLKNNNFENVHFINMLDHLINRGAIIGLHGYTHQHNKQISGLGVELK
CCCCCCCCCCCHHHHCCCCCCCEEHHHHHHHHHCCCEEEEEECCCCCCCCEEECEEEEEE
WNVNSNKNKVLKVVESSLKTAKTLNIPIGFFESPHYKADRNQQKIIEQYFPVMFEPYAGY
ECCCCCHHHHHHHHHHHHHHHEEEECEEECCCCCCCCCCCCHHHHHHHHCCEEECCCCCE
WNLNPLISFSNKSTLYVPAPLGYVKDNGETVARRIRNYSNEILTAFFIHPYIFLGSIENK
ECCCCEEEECCCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCC
NNSTNNEEIYEFNENSPILKVISALKERGCKTITVNELNNQIT
CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA