| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309640
Identifier: 18309640
GI number: 18309640
Start: 821464
End: 822855
Strand: Direct
Name: 18309640
Synonym: CPE0658
Alternate gene names: NA
Gene position: 821464-822855 (Clockwise)
Preceding gene: 18309639
Following gene: 18309641
Centisome position: 27.1
GC content: 24.35
Gene sequence:
>1392_bases GTGAAGAAAAATATTAAGAACATGGCTTTAGTATTATTAATAATTTTTGTGATAGCTTTAATTGTTATAACATTTAAAAT AATTAAATTTAGAAAAAATACAGTGACAGATATAAAAGCTTGTGAAAATAAAATAACTTTTAATTCTAAGATTAAAAGAG AAGAAATAGAGTATTTAAAAGTTGATGGAGAGAAGGATAGACAAGTAAATAAGATTGAAGGGTTAAATTTATTTATAAAT AATAGTAAAGTTAATTTAAGTGATAAAATTTATGAAAAGAATTTAAGGTATTATATTTCTTTAGAAGATTTAGAGAAAAA TGGACAAGTATCAATTGATGGAAATAATGTTTTAAGCAAGACAAATAAAAATTACATAGATTTAGAGAAAAAAGAGATTT TAAAAGAAAAGGATAAATTAGATTTAAGAGGAGAAGTTTTAGATTTAGATCATAAAAAATACATTTCTATAAATGATTTT AAAGAGCTTATTGAAGCTAGAGATGATTGGTACGAAAATAAAAACTCAATTTATATGTTTCAGGGTAAAACTAATAATAT AAACTGCAATTATAAAGTTAATGAAGGAAAAGCTGCTTTAATAAGAATAGAGGATGTTAGTGCTGGGGGAGTTTTTTCTG AAGATAATAATATGGAAAAAATGAAATATTTAAGTGATTATTTTAAAGCTAATAATATAGTATTTCACATAGCTTGGATA CCTAGATACATAAACCCTGAAAAAAACATAGATAATGATTTGCTTAAAAATAATAATTTTGAAAATGTTCATTTTATAAA TATGCTAGATCATTTAATAAATAGAGGGGCTATAATTGGTCTTCATGGATACACTCATCAACATAATAAGCAAATAAGTG GACTTGGAGTAGAGTTAAAATGGAATGTTAATAGTAATAAAAATAAAGTTTTAAAGGTTGTTGAATCCTCATTAAAGACA GCTAAGACCTTAAATATACCTATAGGTTTCTTTGAAAGCCCACATTATAAAGCAGATAGAAATCAGCAAAAAATAATAGA ACAATATTTCCCAGTTATGTTTGAACCTTATGCAGGATATTGGAACTTAAATCCATTAATAAGTTTTAGTAATAAGTCTA CATTATATGTACCTGCTCCTTTAGGATATGTTAAGGATAATGGAGAGACTGTAGCTAGAAGAATTAGAAATTATAGCAAT GAAATTTTAACGGCATTTTTCATACATCCATATATTTTTTTAGGAAGTATAGAGAATAAAAATAATAGCACAAATAATGA GGAAATATATGAGTTTAATGAAAATTCACCTATATTAAAGGTAATATCAGCTTTAAAAGAAAGAGGATGCAAAACCATAA CTGTTAATGAATTAAACAATCAAATTACATAG
Upstream 100 bases:
>100_bases TATATGGTTTATTAACTATAAAAAATATAACTTAATTAAATAGTAAATCCTTAATTAAATTTATAAGGTATATTTTAAAA ATCCATAAAGGGGGAATTCC
Downstream 100 bases:
>100_bases TAAAAGTTTTTATTATGTATTCTTTTAAAATACCATCTTTTACATAGATACTTTTTAAGGTTTAAATAAATTCGACTAAA ATATAAGAATAGTAAATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MKKNIKNMALVLLIIFVIALIVITFKIIKFRKNTVTDIKACENKITFNSKIKREEIEYLKVDGEKDRQVNKIEGLNLFIN NSKVNLSDKIYEKNLRYYISLEDLEKNGQVSIDGNNVLSKTNKNYIDLEKKEILKEKDKLDLRGEVLDLDHKKYISINDF KELIEARDDWYENKNSIYMFQGKTNNINCNYKVNEGKAALIRIEDVSAGGVFSEDNNMEKMKYLSDYFKANNIVFHIAWI PRYINPEKNIDNDLLKNNNFENVHFINMLDHLINRGAIIGLHGYTHQHNKQISGLGVELKWNVNSNKNKVLKVVESSLKT AKTLNIPIGFFESPHYKADRNQQKIIEQYFPVMFEPYAGYWNLNPLISFSNKSTLYVPAPLGYVKDNGETVARRIRNYSN EILTAFFIHPYIFLGSIENKNNSTNNEEIYEFNENSPILKVISALKERGCKTITVNELNNQIT
Sequences:
>Translated_463_residues MKKNIKNMALVLLIIFVIALIVITFKIIKFRKNTVTDIKACENKITFNSKIKREEIEYLKVDGEKDRQVNKIEGLNLFIN NSKVNLSDKIYEKNLRYYISLEDLEKNGQVSIDGNNVLSKTNKNYIDLEKKEILKEKDKLDLRGEVLDLDHKKYISINDF KELIEARDDWYENKNSIYMFQGKTNNINCNYKVNEGKAALIRIEDVSAGGVFSEDNNMEKMKYLSDYFKANNIVFHIAWI PRYINPEKNIDNDLLKNNNFENVHFINMLDHLINRGAIIGLHGYTHQHNKQISGLGVELKWNVNSNKNKVLKVVESSLKT AKTLNIPIGFFESPHYKADRNQQKIIEQYFPVMFEPYAGYWNLNPLISFSNKSTLYVPAPLGYVKDNGETVARRIRNYSN EILTAFFIHPYIFLGSIENKNNSTNNEEIYEFNENSPILKVISALKERGCKTITVNELNNQIT >Mature_463_residues MKKNIKNMALVLLIIFVIALIVITFKIIKFRKNTVTDIKACENKITFNSKIKREEIEYLKVDGEKDRQVNKIEGLNLFIN NSKVNLSDKIYEKNLRYYISLEDLEKNGQVSIDGNNVLSKTNKNYIDLEKKEILKEKDKLDLRGEVLDLDHKKYISINDF KELIEARDDWYENKNSIYMFQGKTNNINCNYKVNEGKAALIRIEDVSAGGVFSEDNNMEKMKYLSDYFKANNIVFHIAWI PRYINPEKNIDNDLLKNNNFENVHFINMLDHLINRGAIIGLHGYTHQHNKQISGLGVELKWNVNSNKNKVLKVVESSLKT AKTLNIPIGFFESPHYKADRNQQKIIEQYFPVMFEPYAGYWNLNPLISFSNKSTLYVPAPLGYVKDNGETVARRIRNYSN EILTAFFIHPYIFLGSIENKNNSTNNEEIYEFNENSPILKVISALKERGCKTITVNELNNQIT
Specific function: Unknown
COG id: COG5298
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53809; Mature: 53809
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNIKNMALVLLIIFVIALIVITFKIIKFRKNTVTDIKACENKITFNSKIKREEIEYLK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEECCCCCCCCEEEEE VDGEKDRQVNKIEGLNLFINNSKVNLSDKIYEKNLRYYISLEDLEKNGQVSIDGNNVLSK ECCCCCCCCHHCCCEEEEEECCEECCHHHHHHCCCEEEEEEEECCCCCEEEECCCCHHHC TNKNYIDLEKKEILKEKDKLDLRGEVLDLDHKKYISINDFKELIEARDDWYENKNSIYMF CCCCEECCCHHHHHHHHCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEE QGKTNNINCNYKVNEGKAALIRIEDVSAGGVFSEDNNMEKMKYLSDYFKANNIVFHIAWI ECCCCCEEEEEEECCCCEEEEEEEECCCCCEECCCCCHHHHHHHHHHHCCCCEEEEEEEE PRYINPEKNIDNDLLKNNNFENVHFINMLDHLINRGAIIGLHGYTHQHNKQISGLGVELK CCCCCCCCCCCHHHHCCCCCCCEEHHHHHHHHHCCCEEEEEECCCCCCCCEEECEEEEEE WNVNSNKNKVLKVVESSLKTAKTLNIPIGFFESPHYKADRNQQKIIEQYFPVMFEPYAGY ECCCCCHHHHHHHHHHHHHHHEEEECEEECCCCCCCCCCCCHHHHHHHHCCEEECCCCCE WNLNPLISFSNKSTLYVPAPLGYVKDNGETVARRIRNYSNEILTAFFIHPYIFLGSIENK ECCCCEEEECCCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCC NNSTNNEEIYEFNENSPILKVISALKERGCKTITVNELNNQIT CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCC >Mature Secondary Structure MKKNIKNMALVLLIIFVIALIVITFKIIKFRKNTVTDIKACENKITFNSKIKREEIEYLK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEECCCCCCCCEEEEE VDGEKDRQVNKIEGLNLFINNSKVNLSDKIYEKNLRYYISLEDLEKNGQVSIDGNNVLSK ECCCCCCCCHHCCCEEEEEECCEECCHHHHHHCCCEEEEEEEECCCCCEEEECCCCHHHC TNKNYIDLEKKEILKEKDKLDLRGEVLDLDHKKYISINDFKELIEARDDWYENKNSIYMF CCCCEECCCHHHHHHHHCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEE QGKTNNINCNYKVNEGKAALIRIEDVSAGGVFSEDNNMEKMKYLSDYFKANNIVFHIAWI ECCCCCEEEEEEECCCCEEEEEEEECCCCCEECCCCCHHHHHHHHHHHCCCCEEEEEEEE PRYINPEKNIDNDLLKNNNFENVHFINMLDHLINRGAIIGLHGYTHQHNKQISGLGVELK CCCCCCCCCCCHHHHCCCCCCCEEHHHHHHHHHCCCEEEEEECCCCCCCCEEECEEEEEE WNVNSNKNKVLKVVESSLKTAKTLNIPIGFFESPHYKADRNQQKIIEQYFPVMFEPYAGY ECCCCCHHHHHHHHHHHHHHHEEEECEEECCCCCCCCCCCCHHHHHHHHCCEEECCCCCE WNLNPLISFSNKSTLYVPAPLGYVKDNGETVARRIRNYSNEILTAFFIHPYIFLGSIENK ECCCCEEEECCCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCC NNSTNNEEIYEFNENSPILKVISALKERGCKTITVNELNNQIT CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA