| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309638
Identifier: 18309638
GI number: 18309638
Start: 818840
End: 819955
Strand: Direct
Name: 18309638
Synonym: CPE0656
Alternate gene names: NA
Gene position: 818840-819955 (Clockwise)
Preceding gene: 18309637
Following gene: 18309639
Centisome position: 27.01
GC content: 29.39
Gene sequence:
>1116_bases GTGGATTTTAAAGAAGCGTTAAGTACAGTTAATTTAGTTCTTATGACAGGAGAAGTACCTCTTTTAATAGGAGAAAGTGG TATAGGAAAAACTTCTTTAGCAAAGGAACTTAGTAGAATAAATAATTATCATTTAGTTACTATAGATGGAAATCTTCTTA AAGAGGGAGAAATAGGTGGTCTCCCAATGGTAGAGAAGAAAGAAATCCTATTTAAAGGAGACGTAGTTAAAAAAAGCGTA ACAAAATATGCTACACATGTAAAACTTATGGAAATTGATGATCATATTGAAAAGGGAGAAAAGGTTCTTTTATTTATTGA TGAATTAAATAGATGTGAGCATGCAGTGCAACAAGAACTTATGAACCTTATATTAAATAGAGAGATAAATGGATATAAGT TAAATGAGGATGTATATATATTAGCAGCTATGAATCCATCAAATAAATATGATAACTATGAAGATAGTGATTATCAGGTT ATTGAAATGGATCCAGCCCAAGAAGATAGATTTGTTTGGATAGATATTAGTTCAAATCTTAAAGAGTGGATGAGTTGGGC AATGGGAGATGGAAATATCCATGAACATATAATAGAGTTTTTATCAACATTCCCTGAATATTTCCACACTCCTAATTCGC TAGAAACAATAAAAGCTACTCCAAGAAGCTGGGAGAGGGTTTCTAAGGCTTATAGAGTGTATTTGGCAAATAAGAAGAAC TTTTCTAAGGAAATATTATATAATGCTTTAAAGGGAAATGTAGGCTCAACAATAGCACAAGAATTTATAGCATATATAAG TAATCTTAATAAGCCTATTATTTCTAATGAAGAAATTTTTGAAAGTGATGTTTTAGGATTTAATATTAGAGAGAGAATAA TGAGTGAAAATCATTCAAGAATGTATATAATAGCTAAGAGTGCTTTATATTATCTTGAGGGATTAAAGGATTATAATAAA GAATTAGAAGTGTTCTCAGATTTATTATCTTGTTATCCTAAGGATTTAAGACTAGGAATAATGAAGGAAATAAAAAGCGA TCACTCAGAAGAATTATATAGAAATTTATTAAATGAGGATAAGTTCTTAGAAGCATTCTTTGAGATATATAGCTAG
Upstream 100 bases:
>100_bases TATAAAATATAGATTAGTTTACAAAATATTTTAGATTTTTCACAAGAGAGTTTATAAGGTAAGTTTCACGGAGAGATTTA TAGAAAGAAGGGATACTAAA
Downstream 100 bases:
>100_bases GTGGTGAAATCTTATGGATTTTGAAAGAACTAGGAGGAAACTTCTTAATATAGCAATGGAAGCTGAAGAAGAGAATAAGT CTTTAACAGATGATTTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: MoxR-Like Protein ATPase-Like Protein; MoxR-Like ATPase; MoxR Like ATPase; ATPase Associated With Various Cellular; ATPase Family Protein; AAA ATPase Central Domain Protein; AAA_3 ATPase; ATPase Family Associated With Various Cellular Activities; AAA ATPase
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MDFKEALSTVNLVLMTGEVPLLIGESGIGKTSLAKELSRINNYHLVTIDGNLLKEGEIGGLPMVEKKEILFKGDVVKKSV TKYATHVKLMEIDDHIEKGEKVLLFIDELNRCEHAVQQELMNLILNREINGYKLNEDVYILAAMNPSNKYDNYEDSDYQV IEMDPAQEDRFVWIDISSNLKEWMSWAMGDGNIHEHIIEFLSTFPEYFHTPNSLETIKATPRSWERVSKAYRVYLANKKN FSKEILYNALKGNVGSTIAQEFIAYISNLNKPIISNEEIFESDVLGFNIRERIMSENHSRMYIIAKSALYYLEGLKDYNK ELEVFSDLLSCYPKDLRLGIMKEIKSDHSEELYRNLLNEDKFLEAFFEIYS
Sequences:
>Translated_371_residues MDFKEALSTVNLVLMTGEVPLLIGESGIGKTSLAKELSRINNYHLVTIDGNLLKEGEIGGLPMVEKKEILFKGDVVKKSV TKYATHVKLMEIDDHIEKGEKVLLFIDELNRCEHAVQQELMNLILNREINGYKLNEDVYILAAMNPSNKYDNYEDSDYQV IEMDPAQEDRFVWIDISSNLKEWMSWAMGDGNIHEHIIEFLSTFPEYFHTPNSLETIKATPRSWERVSKAYRVYLANKKN FSKEILYNALKGNVGSTIAQEFIAYISNLNKPIISNEEIFESDVLGFNIRERIMSENHSRMYIIAKSALYYLEGLKDYNK ELEVFSDLLSCYPKDLRLGIMKEIKSDHSEELYRNLLNEDKFLEAFFEIYS >Mature_371_residues MDFKEALSTVNLVLMTGEVPLLIGESGIGKTSLAKELSRINNYHLVTIDGNLLKEGEIGGLPMVEKKEILFKGDVVKKSV TKYATHVKLMEIDDHIEKGEKVLLFIDELNRCEHAVQQELMNLILNREINGYKLNEDVYILAAMNPSNKYDNYEDSDYQV IEMDPAQEDRFVWIDISSNLKEWMSWAMGDGNIHEHIIEFLSTFPEYFHTPNSLETIKATPRSWERVSKAYRVYLANKKN FSKEILYNALKGNVGSTIAQEFIAYISNLNKPIISNEEIFESDVLGFNIRERIMSENHSRMYIIAKSALYYLEGLKDYNK ELEVFSDLLSCYPKDLRLGIMKEIKSDHSEELYRNLLNEDKFLEAFFEIYS
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42953; Mature: 42953
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFKEALSTVNLVLMTGEVPLLIGESGIGKTSLAKELSRINNYHLVTIDGNLLKEGEIGG CCHHHHHHHHEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCEEECCCCCC LPMVEKKEILFKGDVVKKSVTKYATHVKLMEIDDHIEKGEKVLLFIDELNRCEHAVQQEL CCCCCCCHHEEECHHHHHHHHHHHHHEEEEEHHHHHCCCCEEEEEHHHHHHHHHHHHHHH MNLILNREINGYKLNEDVYILAAMNPSNKYDNYEDSDYQVIEMDPAQEDRFVWIDISSNL HHHHHCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCH KEWMSWAMGDGNIHEHIIEFLSTFPEYFHTPNSLETIKATPRSWERVSKAYRVYLANKKN HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHEEEEECCCC FSKEILYNALKGNVGSTIAQEFIAYISNLNKPIISNEEIFESDVLGFNIRERIMSENHSR HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCE MYIIAKSALYYLEGLKDYNKELEVFSDLLSCYPKDLRLGIMKEIKSDHSEELYRNLLNED EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCHH KFLEAFFEIYS HHHHHHHHHHC >Mature Secondary Structure MDFKEALSTVNLVLMTGEVPLLIGESGIGKTSLAKELSRINNYHLVTIDGNLLKEGEIGG CCHHHHHHHHEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCEEECCCCCC LPMVEKKEILFKGDVVKKSVTKYATHVKLMEIDDHIEKGEKVLLFIDELNRCEHAVQQEL CCCCCCCHHEEECHHHHHHHHHHHHHEEEEEHHHHHCCCCEEEEEHHHHHHHHHHHHHHH MNLILNREINGYKLNEDVYILAAMNPSNKYDNYEDSDYQVIEMDPAQEDRFVWIDISSNL HHHHHCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCH KEWMSWAMGDGNIHEHIIEFLSTFPEYFHTPNSLETIKATPRSWERVSKAYRVYLANKKN HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHEEEEECCCC FSKEILYNALKGNVGSTIAQEFIAYISNLNKPIISNEEIFESDVLGFNIRERIMSENHSR HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCE MYIIAKSALYYLEGLKDYNKELEVFSDLLSCYPKDLRLGIMKEIKSDHSEELYRNLLNED EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCHH KFLEAFFEIYS HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA