Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is 18309638

Identifier: 18309638

GI number: 18309638

Start: 818840

End: 819955

Strand: Direct

Name: 18309638

Synonym: CPE0656

Alternate gene names: NA

Gene position: 818840-819955 (Clockwise)

Preceding gene: 18309637

Following gene: 18309639

Centisome position: 27.01

GC content: 29.39

Gene sequence:

>1116_bases
GTGGATTTTAAAGAAGCGTTAAGTACAGTTAATTTAGTTCTTATGACAGGAGAAGTACCTCTTTTAATAGGAGAAAGTGG
TATAGGAAAAACTTCTTTAGCAAAGGAACTTAGTAGAATAAATAATTATCATTTAGTTACTATAGATGGAAATCTTCTTA
AAGAGGGAGAAATAGGTGGTCTCCCAATGGTAGAGAAGAAAGAAATCCTATTTAAAGGAGACGTAGTTAAAAAAAGCGTA
ACAAAATATGCTACACATGTAAAACTTATGGAAATTGATGATCATATTGAAAAGGGAGAAAAGGTTCTTTTATTTATTGA
TGAATTAAATAGATGTGAGCATGCAGTGCAACAAGAACTTATGAACCTTATATTAAATAGAGAGATAAATGGATATAAGT
TAAATGAGGATGTATATATATTAGCAGCTATGAATCCATCAAATAAATATGATAACTATGAAGATAGTGATTATCAGGTT
ATTGAAATGGATCCAGCCCAAGAAGATAGATTTGTTTGGATAGATATTAGTTCAAATCTTAAAGAGTGGATGAGTTGGGC
AATGGGAGATGGAAATATCCATGAACATATAATAGAGTTTTTATCAACATTCCCTGAATATTTCCACACTCCTAATTCGC
TAGAAACAATAAAAGCTACTCCAAGAAGCTGGGAGAGGGTTTCTAAGGCTTATAGAGTGTATTTGGCAAATAAGAAGAAC
TTTTCTAAGGAAATATTATATAATGCTTTAAAGGGAAATGTAGGCTCAACAATAGCACAAGAATTTATAGCATATATAAG
TAATCTTAATAAGCCTATTATTTCTAATGAAGAAATTTTTGAAAGTGATGTTTTAGGATTTAATATTAGAGAGAGAATAA
TGAGTGAAAATCATTCAAGAATGTATATAATAGCTAAGAGTGCTTTATATTATCTTGAGGGATTAAAGGATTATAATAAA
GAATTAGAAGTGTTCTCAGATTTATTATCTTGTTATCCTAAGGATTTAAGACTAGGAATAATGAAGGAAATAAAAAGCGA
TCACTCAGAAGAATTATATAGAAATTTATTAAATGAGGATAAGTTCTTAGAAGCATTCTTTGAGATATATAGCTAG

Upstream 100 bases:

>100_bases
TATAAAATATAGATTAGTTTACAAAATATTTTAGATTTTTCACAAGAGAGTTTATAAGGTAAGTTTCACGGAGAGATTTA
TAGAAAGAAGGGATACTAAA

Downstream 100 bases:

>100_bases
GTGGTGAAATCTTATGGATTTTGAAAGAACTAGGAGGAAACTTCTTAATATAGCAATGGAAGCTGAAGAAGAGAATAAGT
CTTTAACAGATGATTTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: MoxR-Like Protein ATPase-Like Protein; MoxR-Like ATPase; MoxR Like ATPase; ATPase Associated With Various Cellular; ATPase Family Protein; AAA ATPase Central Domain Protein; AAA_3 ATPase; ATPase Family Associated With Various Cellular Activities; AAA ATPase

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MDFKEALSTVNLVLMTGEVPLLIGESGIGKTSLAKELSRINNYHLVTIDGNLLKEGEIGGLPMVEKKEILFKGDVVKKSV
TKYATHVKLMEIDDHIEKGEKVLLFIDELNRCEHAVQQELMNLILNREINGYKLNEDVYILAAMNPSNKYDNYEDSDYQV
IEMDPAQEDRFVWIDISSNLKEWMSWAMGDGNIHEHIIEFLSTFPEYFHTPNSLETIKATPRSWERVSKAYRVYLANKKN
FSKEILYNALKGNVGSTIAQEFIAYISNLNKPIISNEEIFESDVLGFNIRERIMSENHSRMYIIAKSALYYLEGLKDYNK
ELEVFSDLLSCYPKDLRLGIMKEIKSDHSEELYRNLLNEDKFLEAFFEIYS

Sequences:

>Translated_371_residues
MDFKEALSTVNLVLMTGEVPLLIGESGIGKTSLAKELSRINNYHLVTIDGNLLKEGEIGGLPMVEKKEILFKGDVVKKSV
TKYATHVKLMEIDDHIEKGEKVLLFIDELNRCEHAVQQELMNLILNREINGYKLNEDVYILAAMNPSNKYDNYEDSDYQV
IEMDPAQEDRFVWIDISSNLKEWMSWAMGDGNIHEHIIEFLSTFPEYFHTPNSLETIKATPRSWERVSKAYRVYLANKKN
FSKEILYNALKGNVGSTIAQEFIAYISNLNKPIISNEEIFESDVLGFNIRERIMSENHSRMYIIAKSALYYLEGLKDYNK
ELEVFSDLLSCYPKDLRLGIMKEIKSDHSEELYRNLLNEDKFLEAFFEIYS
>Mature_371_residues
MDFKEALSTVNLVLMTGEVPLLIGESGIGKTSLAKELSRINNYHLVTIDGNLLKEGEIGGLPMVEKKEILFKGDVVKKSV
TKYATHVKLMEIDDHIEKGEKVLLFIDELNRCEHAVQQELMNLILNREINGYKLNEDVYILAAMNPSNKYDNYEDSDYQV
IEMDPAQEDRFVWIDISSNLKEWMSWAMGDGNIHEHIIEFLSTFPEYFHTPNSLETIKATPRSWERVSKAYRVYLANKKN
FSKEILYNALKGNVGSTIAQEFIAYISNLNKPIISNEEIFESDVLGFNIRERIMSENHSRMYIIAKSALYYLEGLKDYNK
ELEVFSDLLSCYPKDLRLGIMKEIKSDHSEELYRNLLNEDKFLEAFFEIYS

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42953; Mature: 42953

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFKEALSTVNLVLMTGEVPLLIGESGIGKTSLAKELSRINNYHLVTIDGNLLKEGEIGG
CCHHHHHHHHEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCEEECCCCCC
LPMVEKKEILFKGDVVKKSVTKYATHVKLMEIDDHIEKGEKVLLFIDELNRCEHAVQQEL
CCCCCCCHHEEECHHHHHHHHHHHHHEEEEEHHHHHCCCCEEEEEHHHHHHHHHHHHHHH
MNLILNREINGYKLNEDVYILAAMNPSNKYDNYEDSDYQVIEMDPAQEDRFVWIDISSNL
HHHHHCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCH
KEWMSWAMGDGNIHEHIIEFLSTFPEYFHTPNSLETIKATPRSWERVSKAYRVYLANKKN
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHEEEEECCCC
FSKEILYNALKGNVGSTIAQEFIAYISNLNKPIISNEEIFESDVLGFNIRERIMSENHSR
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCE
MYIIAKSALYYLEGLKDYNKELEVFSDLLSCYPKDLRLGIMKEIKSDHSEELYRNLLNED
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCHH
KFLEAFFEIYS
HHHHHHHHHHC
>Mature Secondary Structure
MDFKEALSTVNLVLMTGEVPLLIGESGIGKTSLAKELSRINNYHLVTIDGNLLKEGEIGG
CCHHHHHHHHEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCEEECCCCCC
LPMVEKKEILFKGDVVKKSVTKYATHVKLMEIDDHIEKGEKVLLFIDELNRCEHAVQQEL
CCCCCCCHHEEECHHHHHHHHHHHHHEEEEEHHHHHCCCCEEEEEHHHHHHHHHHHHHHH
MNLILNREINGYKLNEDVYILAAMNPSNKYDNYEDSDYQVIEMDPAQEDRFVWIDISSNL
HHHHHCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCH
KEWMSWAMGDGNIHEHIIEFLSTFPEYFHTPNSLETIKATPRSWERVSKAYRVYLANKKN
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHEEEEECCCC
FSKEILYNALKGNVGSTIAQEFIAYISNLNKPIISNEEIFESDVLGFNIRERIMSENHSR
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCE
MYIIAKSALYYLEGLKDYNKELEVFSDLLSCYPKDLRLGIMKEIKSDHSEELYRNLLNED
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCHH
KFLEAFFEIYS
HHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA