| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309637
Identifier: 18309637
GI number: 18309637
Start: 817937
End: 818722
Strand: Direct
Name: 18309637
Synonym: CPE0655
Alternate gene names: NA
Gene position: 817937-818722 (Clockwise)
Preceding gene: 18309636
Following gene: 18309638
Centisome position: 26.98
GC content: 28.5
Gene sequence:
>786_bases ATGAATGCTATGGATAATTTAGAATTAAAAAAGATTAAGGAAAATCCTTTATATATAAGAGAAATAGAAAATCCATCAGA GGAGATGCAACTAGAGGCTATTAAGAAAAATCCATTTACAATTCAATATGTTGAAAATCAATGTGAAAAATGTAAAGAGG AAGCTGTAAGAAGAAATCCAACTACTATAGAGTATGTTAAAAATCCATCAGAGGAAATATGCATATTAGCAGTAAAATCT CTATGGAATGCCTTAAAGCTTATTAAGGAACCTTCAGAAAAGGTGGTTGAAGAGGCTGTTAAAACTAAGGGGTGGGCTAT ACAATTTGTGAAAAATCCTTCAGAAAAGTTAAAACAAATAGCTGTTTCTAGGGATTATGATGCAATAAAGTATATAGAAG ATCCATCACCAGAAGTTCAGCTTATAGCTGTTAAAAATCATTGGTCAGCAATTAAATTTATAAAAAATCCTACTTTAGAA GCAATGAGAACTTCAGTTAAGGAAGATGCTGAGGCAATAAACTTCTTACCAAACTATACTTATGAAGATTTAGAAACTTT TATAGGAGATAATATAAATGTTGTTAAATACCTTTATGAAAGTATAGATGTTGATATGGTTGTTGATATACTTACAAAAA AAGTTGCAGAAGAGAATGTAGATGAAAGATATCTTTTAGATTTTATAGATTTAGAAGTCTTAGAGATGAACAAAGTAGAA TTTATCAAAGAATATGGAAGTAAAAGAGCAAAGATAATATTAGTTGATAGTATGTTATCAATATAA
Upstream 100 bases:
>100_bases TTGATAGAATTACTCAACTTTAACGGAGCAACACATTATTTGAGTTTTAAAATGATTGAGCATTTATTGAGAGAAAAATA AAATTGAGGAAGTGTAATTT
Downstream 100 bases:
>100_bases AGATAGAGATTTAAAAATATAAAATATAGATTAGTTTACAAAATATTTTAGATTTTTCACAAGAGAGTTTATAAGGTAAG TTTCACGGAGAGATTTATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MNAMDNLELKKIKENPLYIREIENPSEEMQLEAIKKNPFTIQYVENQCEKCKEEAVRRNPTTIEYVKNPSEEICILAVKS LWNALKLIKEPSEKVVEEAVKTKGWAIQFVKNPSEKLKQIAVSRDYDAIKYIEDPSPEVQLIAVKNHWSAIKFIKNPTLE AMRTSVKEDAEAINFLPNYTYEDLETFIGDNINVVKYLYESIDVDMVVDILTKKVAEENVDERYLLDFIDLEVLEMNKVE FIKEYGSKRAKIILVDSMLSI
Sequences:
>Translated_261_residues MNAMDNLELKKIKENPLYIREIENPSEEMQLEAIKKNPFTIQYVENQCEKCKEEAVRRNPTTIEYVKNPSEEICILAVKS LWNALKLIKEPSEKVVEEAVKTKGWAIQFVKNPSEKLKQIAVSRDYDAIKYIEDPSPEVQLIAVKNHWSAIKFIKNPTLE AMRTSVKEDAEAINFLPNYTYEDLETFIGDNINVVKYLYESIDVDMVVDILTKKVAEENVDERYLLDFIDLEVLEMNKVE FIKEYGSKRAKIILVDSMLSI >Mature_261_residues MNAMDNLELKKIKENPLYIREIENPSEEMQLEAIKKNPFTIQYVENQCEKCKEEAVRRNPTTIEYVKNPSEEICILAVKS LWNALKLIKEPSEKVVEEAVKTKGWAIQFVKNPSEKLKQIAVSRDYDAIKYIEDPSPEVQLIAVKNHWSAIKFIKNPTLE AMRTSVKEDAEAINFLPNYTYEDLETFIGDNINVVKYLYESIDVDMVVDILTKKVAEENVDERYLLDFIDLEVLEMNKVE FIKEYGSKRAKIILVDSMLSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30319; Mature: 30319
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAMDNLELKKIKENPLYIREIENPSEEMQLEAIKKNPFTIQYVENQCEKCKEEAVRRNP CCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCC TTIEYVKNPSEEICILAVKSLWNALKLIKEPSEKVVEEAVKTKGWAIQFVKNPSEKLKQI CEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCHHHHHHHH AVSRDYDAIKYIEDPSPEVQLIAVKNHWSAIKFIKNPTLEAMRTSVKEDAEAINFLPNYT HHCCCCCHHHHCCCCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC YEDLETFIGDNINVVKYLYESIDVDMVVDILTKKVAEENVDERYLLDFIDLEVLEMNKVE HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FIKEYGSKRAKIILVDSMLSI HHHHHCCCCEEEEEECCHHCC >Mature Secondary Structure MNAMDNLELKKIKENPLYIREIENPSEEMQLEAIKKNPFTIQYVENQCEKCKEEAVRRNP CCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCC TTIEYVKNPSEEICILAVKSLWNALKLIKEPSEKVVEEAVKTKGWAIQFVKNPSEKLKQI CEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCHHHHHHHH AVSRDYDAIKYIEDPSPEVQLIAVKNHWSAIKFIKNPTLEAMRTSVKEDAEAINFLPNYT HHCCCCCHHHHCCCCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC YEDLETFIGDNINVVKYLYESIDVDMVVDILTKKVAEENVDERYLLDFIDLEVLEMNKVE HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FIKEYGSKRAKIILVDSMLSI HHHHHCCCCEEEEEECCHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA