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The map label for this gene is ycsE [H]

Identifier: 18309591

GI number: 18309591

Start: 762581

End: 763420

Strand: Direct

Name: ycsE [H]

Synonym: CPE0609

Alternate gene names: 18309591

Gene position: 762581-763420 (Clockwise)

Preceding gene: 18309589

Following gene: 18309595

Centisome position: 25.16

GC content: 28.21

Gene sequence:

>840_bases
ATGTCATATAAATTAATATGTATAGATATGGATGGAACATTATTAAATAATAAACATGAAATTAGTGAAAGAAATAAAGA
GGCTATAAAAAAAGCTACAGAGAGAGGCGTAAAGGTAGCTGTAACAACAGGTAGATTATTTGCATCAGCTAAATATTATG
CAGGACTTTTAGGAGTTAAAACACCTATAATATCATGTAATGGTGCTTTTATAAGAGAAAAGGATGAAGATAAAGTAATA
TATGAATCTGTTTTAAATGAGGATCAACTAGATAGAATATATGATGTCATAAAAAAATATGATATTAATATGGCCTATTT
TAATACACCAAACACTGTAATCTCTGAAAAGATTGTTCCAGAAGAGCATGGCTATAAGGTTATGAATAAAATGATGGGAG
AATCAAAGGAAAAGGTAATGTTTTCAGAAGGAATAGATTTTAAAGAAGCTTTTAAAACTTATGGGAAACATATACTTAAG
GCTATTTGTATAGAAAATGATAGTAATAAGCTTGAAGATTTATTTAAGGCAAAAGAAGAATTGAAAAAATATGAAGATTT
AGAAGTTGTAAGTTCTTCACCAAGTAACTTTGAAGTAATGAATAAAGGTACTTCAAAAGGACGTGCAGTAAAAGTTTTAG
CTGATATATTAAATATAAACAGAGAAGAGATTATGTGTTTAGGAGATAGTGAAAATGATCTTAGTATGATAGAGTTTGCA
GGTCTTGGAGTAGCTATGGGAAATGCAGAAGAGTTTTTAAAAGAAAAAGCTGATTACATAACAGATACAAATGAAAATGA
TGGAGTAGCTAAAGCTATAGAAAAGTTTGTATTAGATTAA

Upstream 100 bases:

>100_bases
ATTAATAAAGTTGAAAAAAGAAATACTATACTTTAGGATGGTATAATAAGAAGAAAAAATAGATAATAGACAGTTGGAAG
TTTGGAGGGAGAATTTAATT

Downstream 100 bases:

>100_bases
TTTAACCATATTTTTTATAATATAGAAGATATTAATTTTATACAAGATTAAATGAAAAGGTAAGTTTTTTTATTTAGTAT
TTTAAAAATATTTTCTTAAA

Product: HAD hydrolase, IIB family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MSYKLICIDMDGTLLNNKHEISERNKEAIKKATERGVKVAVTTGRLFASAKYYAGLLGVKTPIISCNGAFIREKDEDKVI
YESVLNEDQLDRIYDVIKKYDINMAYFNTPNTVISEKIVPEEHGYKVMNKMMGESKEKVMFSEGIDFKEAFKTYGKHILK
AICIENDSNKLEDLFKAKEELKKYEDLEVVSSSPSNFEVMNKGTSKGRAVKVLADILNINREEIMCLGDSENDLSMIEFA
GLGVAMGNAEEFLKEKADYITDTNENDGVAKAIEKFVLD

Sequences:

>Translated_279_residues
MSYKLICIDMDGTLLNNKHEISERNKEAIKKATERGVKVAVTTGRLFASAKYYAGLLGVKTPIISCNGAFIREKDEDKVI
YESVLNEDQLDRIYDVIKKYDINMAYFNTPNTVISEKIVPEEHGYKVMNKMMGESKEKVMFSEGIDFKEAFKTYGKHILK
AICIENDSNKLEDLFKAKEELKKYEDLEVVSSSPSNFEVMNKGTSKGRAVKVLADILNINREEIMCLGDSENDLSMIEFA
GLGVAMGNAEEFLKEKADYITDTNENDGVAKAIEKFVLD
>Mature_278_residues
SYKLICIDMDGTLLNNKHEISERNKEAIKKATERGVKVAVTTGRLFASAKYYAGLLGVKTPIISCNGAFIREKDEDKVIY
ESVLNEDQLDRIYDVIKKYDINMAYFNTPNTVISEKIVPEEHGYKVMNKMMGESKEKVMFSEGIDFKEAFKTYGKHILKA
ICIENDSNKLEDLFKAKEELKKYEDLEVVSSSPSNFEVMNKGTSKGRAVKVLADILNINREEIMCLGDSENDLSMIEFAG
LGVAMGNAEEFLKEKADYITDTNENDGVAKAIEKFVLD

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=288, Percent_Identity=35.4166666666667, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1786982, Length=294, Percent_Identity=26.530612244898, Blast_Score=98, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 31471; Mature: 31340

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKLICIDMDGTLLNNKHEISERNKEAIKKATERGVKVAVTTGRLFASAKYYAGLLGVK
CCEEEEEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHC
TPIISCNGAFIREKDEDKVIYESVLNEDQLDRIYDVIKKYDINMAYFNTPNTVISEKIVP
CCEEECCCCEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCC
EEHGYKVMNKMMGESKEKVMFSEGIDFKEAFKTYGKHILKAICIENDSNKLEDLFKAKEE
CCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LKKYEDLEVVSSSPSNFEVMNKGTSKGRAVKVLADILNINREEIMCLGDSENDLSMIEFA
HHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHEEEECCCCCCCHHHHHH
GLGVAMGNAEEFLKEKADYITDTNENDGVAKAIEKFVLD
CCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SYKLICIDMDGTLLNNKHEISERNKEAIKKATERGVKVAVTTGRLFASAKYYAGLLGVK
CEEEEEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHC
TPIISCNGAFIREKDEDKVIYESVLNEDQLDRIYDVIKKYDINMAYFNTPNTVISEKIVP
CCEEECCCCEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCC
EEHGYKVMNKMMGESKEKVMFSEGIDFKEAFKTYGKHILKAICIENDSNKLEDLFKAKEE
CCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LKKYEDLEVVSSSPSNFEVMNKGTSKGRAVKVLADILNINREEIMCLGDSENDLSMIEFA
HHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHEEEECCCCCCCHHHHHH
GLGVAMGNAEEFLKEKADYITDTNENDGVAKAIEKFVLD
CCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]