| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is yqgS [H]
Identifier: 18309586
GI number: 18309586
Start: 755187
End: 757031
Strand: Direct
Name: yqgS [H]
Synonym: CPE0604
Alternate gene names: 18309586
Gene position: 755187-757031 (Clockwise)
Preceding gene: 18309585
Following gene: 18309588
Centisome position: 24.91
GC content: 27.21
Gene sequence:
>1845_bases ATGGCTAAAAGTAATGGACTTTTAAGTAAAATAGGTGGATTCTTTAAAAAGTTTCCTTTAGAAATTTTATTTTATATTTT ACTTGTATTTAAGATAACTGTTTTTTGTACAATGCTAAAAAGCAATAGTGGAATGGAGCTGAATTTAGGATTTGTATATG GATTAATAGACTATAAGATAATATATCTTTTATTCCCATTAATATTCATAAGTTTTGGGTTTTTATTTAAAAGATGGGGA AAGTTTATTTATCTATATATTGTAGACTTAGGAATTTCAGCACTTTTAATTTTTGATTTACTTTATTACAGACTTTATGG AACTTTTCCATCAATAAAGTTTTTAATTTACTCAGATTTATTTAATCCTTTAAATAAGGATCTTATCTTCTTTAGAAGTA GGATGCTATTATTTATAATAGACTTAGTATTATTACCTATACTTTACATATTATTTAGAAAGTACACTAAGGATTGGTAT TTTGGAAAGGTAAAATATAGAGTTATAGCATTTTTATTAACATTCTTAGTACCAAGTGGATGTGTGTTAGGAAAATACTA TTTATATGATGTTAAGGATATAACTAATGGAGAAAAAGGATTCTTAAGGGTTGCTTGGACACCAACTAGTGGAATTTTCA GAGCTACTCCTTTAGGATATCATTTCTTTGATATTTATAAGACATTAGTTCTTGATAAGGATATAAAATTAAGCAATGAA GAAAAACAAGAAGTTAAAAATTGGCTTGATGCAAATTATGAAAACTTACCGGACAATCAATATAAAGGGGAATTAAAAGG AAAAAACTTAGTTGTGTTACAAATTGAATCTTTAGAAGATTTTGTTATAAATAAAAAAATTGATGGACAGGAGATAACTC CTACATTAAATTCAATACTAAAGAATTCATATTATTTCCCTAATATTTATGAAGAAAACTTAACTGGATTTAGTTCAGAT GCAGATTTAATGGTTAATACAGGTATGTTACCAATAACTAATACTGCTACATCTTTTGCTTATCCAAGTAGAACTTTAAC AACATTGCCATCTATATTAGAAAAGAATGGTTATACTACAGTTTCAGCTCATCCAGAAGTAGCTGGAAGTTGGAATTGGG GGGAAGTACACCACAGTTTACTAAAATTCCAAAATTCATATACATTATATGACTTTAATGAAGATGAAATAATTGGATTA GGAATTTCAGATAAGAGTTACTTAACTCAATTAGCTACTAAGGCTGGGGATTTAAAACAACCATTCTATCTATTTACTGT TACTTTAACAAATCATGGTCCTTTTGAGATTGATGATGCACATACAACAATAAAAATACCTAGTGAAATAGAAGGAACTC TTATAGGACAATACTTTAAAACAGTAAGATATACAGATGAAGCTATTAAAATGTTTATGGACAAGCTAAAAGAAGAAGGA AGATTTGATGATACTGTATTTGTTATATATGGTGATCATGCTGGTCCAAATAAATATTATAAAGAGCAATTAAAAGATGT TAATTTTGACGGTAACTATTGGAAGCTTAATGAGAAAAAAGTACCACTTATAATCTATAATCCATCAATACAAGGAAAAA CAATAGAAACTAAAGGTGGACTTATAGATGTTATGCCAACAGTTTCATATCTTTTAGGGATTAATGATAGCAGCTTAAGA AATGTAATAGGAAGAAATCTTTTAAATACAAATAGAAATATAGTAGCATTGCCAGAGGGTGAAGTAGCAGGAGAGGCTAA ATCTCAAGATGAATTAAATCATGTTAAGAAATCTTATGATATATCAACTAAGATAATAAGATCAGATTATTTTAAAAATA ATTAA
Upstream 100 bases:
>100_bases AATGTAAAAAGTTTACTTGGTAATAGATTCGAAAAATGCAATAATAATAGAGTGATAACTAAATATTTATTTACTAATTA TATTAGAAAGGAGAAAATTT
Downstream 100 bases:
>100_bases TAAGAAGGAGACTTTGAAAAAATAAGTTTTAAATATTTTTAATATAAGTTCTCAAGTTTGTATAAAAAAAGTAGCTATGA AAATTCATAGCTACTTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MAKSNGLLSKIGGFFKKFPLEILFYILLVFKITVFCTMLKSNSGMELNLGFVYGLIDYKIIYLLFPLIFISFGFLFKRWG KFIYLYIVDLGISALLIFDLLYYRLYGTFPSIKFLIYSDLFNPLNKDLIFFRSRMLLFIIDLVLLPILYILFRKYTKDWY FGKVKYRVIAFLLTFLVPSGCVLGKYYLYDVKDITNGEKGFLRVAWTPTSGIFRATPLGYHFFDIYKTLVLDKDIKLSNE EKQEVKNWLDANYENLPDNQYKGELKGKNLVVLQIESLEDFVINKKIDGQEITPTLNSILKNSYYFPNIYEENLTGFSSD ADLMVNTGMLPITNTATSFAYPSRTLTTLPSILEKNGYTTVSAHPEVAGSWNWGEVHHSLLKFQNSYTLYDFNEDEIIGL GISDKSYLTQLATKAGDLKQPFYLFTVTLTNHGPFEIDDAHTTIKIPSEIEGTLIGQYFKTVRYTDEAIKMFMDKLKEEG RFDDTVFVIYGDHAGPNKYYKEQLKDVNFDGNYWKLNEKKVPLIIYNPSIQGKTIETKGGLIDVMPTVSYLLGINDSSLR NVIGRNLLNTNRNIVALPEGEVAGEAKSQDELNHVKKSYDISTKIIRSDYFKNN
Sequences:
>Translated_614_residues MAKSNGLLSKIGGFFKKFPLEILFYILLVFKITVFCTMLKSNSGMELNLGFVYGLIDYKIIYLLFPLIFISFGFLFKRWG KFIYLYIVDLGISALLIFDLLYYRLYGTFPSIKFLIYSDLFNPLNKDLIFFRSRMLLFIIDLVLLPILYILFRKYTKDWY FGKVKYRVIAFLLTFLVPSGCVLGKYYLYDVKDITNGEKGFLRVAWTPTSGIFRATPLGYHFFDIYKTLVLDKDIKLSNE EKQEVKNWLDANYENLPDNQYKGELKGKNLVVLQIESLEDFVINKKIDGQEITPTLNSILKNSYYFPNIYEENLTGFSSD ADLMVNTGMLPITNTATSFAYPSRTLTTLPSILEKNGYTTVSAHPEVAGSWNWGEVHHSLLKFQNSYTLYDFNEDEIIGL GISDKSYLTQLATKAGDLKQPFYLFTVTLTNHGPFEIDDAHTTIKIPSEIEGTLIGQYFKTVRYTDEAIKMFMDKLKEEG RFDDTVFVIYGDHAGPNKYYKEQLKDVNFDGNYWKLNEKKVPLIIYNPSIQGKTIETKGGLIDVMPTVSYLLGINDSSLR NVIGRNLLNTNRNIVALPEGEVAGEAKSQDELNHVKKSYDISTKIIRSDYFKNN >Mature_613_residues AKSNGLLSKIGGFFKKFPLEILFYILLVFKITVFCTMLKSNSGMELNLGFVYGLIDYKIIYLLFPLIFISFGFLFKRWGK FIYLYIVDLGISALLIFDLLYYRLYGTFPSIKFLIYSDLFNPLNKDLIFFRSRMLLFIIDLVLLPILYILFRKYTKDWYF GKVKYRVIAFLLTFLVPSGCVLGKYYLYDVKDITNGEKGFLRVAWTPTSGIFRATPLGYHFFDIYKTLVLDKDIKLSNEE KQEVKNWLDANYENLPDNQYKGELKGKNLVVLQIESLEDFVINKKIDGQEITPTLNSILKNSYYFPNIYEENLTGFSSDA DLMVNTGMLPITNTATSFAYPSRTLTTLPSILEKNGYTTVSAHPEVAGSWNWGEVHHSLLKFQNSYTLYDFNEDEIIGLG ISDKSYLTQLATKAGDLKQPFYLFTVTLTNHGPFEIDDAHTTIKIPSEIEGTLIGQYFKTVRYTDEAIKMFMDKLKEEGR FDDTVFVIYGDHAGPNKYYKEQLKDVNFDGNYWKLNEKKVPLIIYNPSIQGKTIETKGGLIDVMPTVSYLLGINDSSLRN VIGRNLLNTNRNIVALPEGEVAGEAKSQDELNHVKKSYDISTKIIRSDYFKNN
Specific function: Unknown
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Processed uncharacterized protein yqgS:Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LTA synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012160 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 70642; Mature: 70510
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSNGLLSKIGGFFKKFPLEILFYILLVFKITVFCTMLKSNSGMELNLGFVYGLIDYKI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH IYLLFPLIFISFGFLFKRWGKFIYLYIVDLGISALLIFDLLYYRLYGTFPSIKFLIYSDL HHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH FNPLNKDLIFFRSRMLLFIIDLVLLPILYILFRKYTKDWYFGKVKYRVIAFLLTFLVPSG HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCC CVLGKYYLYDVKDITNGEKGFLRVAWTPTSGIFRATPLGYHFFDIYKTLVLDKDIKLSNE CEEEEEEEEEEHHCCCCCCCEEEEEECCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCH EKQEVKNWLDANYENLPDNQYKGELKGKNLVVLQIESLEDFVINKKIDGQEITPTLNSIL HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHH KNSYYFPNIYEENLTGFSSDADLMVNTGMLPITNTATSFAYPSRTLTTLPSILEKNGYTT HCCCCCCCCHHHCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEE VSAHPEVAGSWNWGEVHHSLLKFQNSYTLYDFNEDEIIGLGISDKSYLTQLATKAGDLKQ EECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCHHHHHHHHHHCCCCCC PFYLFTVTLTNHGPFEIDDAHTTIKIPSEIEGTLIGQYFKTVRYTDEAIKMFMDKLKEEG CEEEEEEEEECCCCEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RFDDTVFVIYGDHAGPNKYYKEQLKDVNFDGNYWKLNEKKVPLIIYNPSIQGKTIETKGG CCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCCCEEECCCC LIDVMPTVSYLLGINDSSLRNVIGRNLLNTNRNIVALPEGEVAGEAKSQDELNHVKKSYD EEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCC ISTKIIRSDYFKNN HHHHHHHHHHCCCC >Mature Secondary Structure AKSNGLLSKIGGFFKKFPLEILFYILLVFKITVFCTMLKSNSGMELNLGFVYGLIDYKI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH IYLLFPLIFISFGFLFKRWGKFIYLYIVDLGISALLIFDLLYYRLYGTFPSIKFLIYSDL HHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH FNPLNKDLIFFRSRMLLFIIDLVLLPILYILFRKYTKDWYFGKVKYRVIAFLLTFLVPSG HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCC CVLGKYYLYDVKDITNGEKGFLRVAWTPTSGIFRATPLGYHFFDIYKTLVLDKDIKLSNE CEEEEEEEEEEHHCCCCCCCEEEEEECCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCH EKQEVKNWLDANYENLPDNQYKGELKGKNLVVLQIESLEDFVINKKIDGQEITPTLNSIL HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHH KNSYYFPNIYEENLTGFSSDADLMVNTGMLPITNTATSFAYPSRTLTTLPSILEKNGYTT HCCCCCCCCHHHCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEE VSAHPEVAGSWNWGEVHHSLLKFQNSYTLYDFNEDEIIGLGISDKSYLTQLATKAGDLKQ EECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCHHHHHHHHHHCCCCCC PFYLFTVTLTNHGPFEIDDAHTTIKIPSEIEGTLIGQYFKTVRYTDEAIKMFMDKLKEEG CEEEEEEEEECCCCEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RFDDTVFVIYGDHAGPNKYYKEQLKDVNFDGNYWKLNEKKVPLIIYNPSIQGKTIETKGG CCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCCCEEECCCC LIDVMPTVSYLLGINDSSLRNVIGRNLLNTNRNIVALPEGEVAGEAKSQDELNHVKKSYD EEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCC ISTKIIRSDYFKNN HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]