| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18309578
Identifier: 18309578
GI number: 18309578
Start: 744879
End: 745145
Strand: Direct
Name: 18309578
Synonym: CPE0596
Alternate gene names: NA
Gene position: 744879-745145 (Clockwise)
Preceding gene: 18309577
Following gene: 18309579
Centisome position: 24.57
GC content: 29.21
Gene sequence:
>267_bases TTGAGTTTAAAGATTTCTCACACTAATATTCGGAGCAAGGAGTATAAAATGAAAAAAATAATAGTAGATAGAATAGAAGG ACATTTTATTGTATGTGAAGATGAAAAAGAAAATATTTTAGAATTAAAAAAAGATGACGTAATAGGTGACGTAAAAGAGG GGGATGTTTTAGTTAAAGGCAAAGAGGGTAAGTTTTGCTTGGATAAAGCGCTTACAGAAAAAAGAAAAAAAGAAATAGAA GATTTGATGAAAGGTATGTGGGAATAG
Upstream 100 bases:
>100_bases AAAGTTTACAAAGTTATGGTAATTTATGATATACTTATACTTGATACTTTAAGATTATTAAAGGTAAAAAATTCTAAAAT TATTGAGGAATGATTTTAAA
Downstream 100 bases:
>100_bases TAATGAGTTCTAGTAATACAAAGAAGAAATCATTCTTTTTAGATTGGATTATACCAATTTTAGCAGCTTTACTATTAGCA GCTTTGATTCATCAATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MSLKISHTNIRSKEYKMKKIIVDRIEGHFIVCEDEKENILELKKDDVIGDVKEGDVLVKGKEGKFCLDKALTEKRKKEIE DLMKGMWE
Sequences:
>Translated_88_residues MSLKISHTNIRSKEYKMKKIIVDRIEGHFIVCEDEKENILELKKDDVIGDVKEGDVLVKGKEGKFCLDKALTEKRKKEIE DLMKGMWE >Mature_87_residues SLKISHTNIRSKEYKMKKIIVDRIEGHFIVCEDEKENILELKKDDVIGDVKEGDVLVKGKEGKFCLDKALTEKRKKEIED LMKGMWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10295; Mature: 10164
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKISHTNIRSKEYKMKKIIVDRIEGHFIVCEDEKENILELKKDDVIGDVKEGDVLVKG CCEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCEEEEC KEGKFCLDKALTEKRKKEIEDLMKGMWE CCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLKISHTNIRSKEYKMKKIIVDRIEGHFIVCEDEKENILELKKDDVIGDVKEGDVLVKG CEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCEEEEC KEGKFCLDKALTEKRKKEIEDLMKGMWE CCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA