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The map label for this gene is nudC [H]

Identifier: 18309576

GI number: 18309576

Start: 742291

End: 742764

Strand: Direct

Name: nudC [H]

Synonym: CPE0594

Alternate gene names: 18309576

Gene position: 742291-742764 (Clockwise)

Preceding gene: 18309575

Following gene: 18309577

Centisome position: 24.49

GC content: 28.48

Gene sequence:

>474_bases
ATGATACCTTATTGCAGTAAACATGATATGATGTTTTTTGATTTACCTAAGCCTTGTATTGTTGTTGCTGTAATAAAAGG
TGATGAGATAATTCTTTTAAAGCAAAGTTATATATATGAAAATTCTAAAGTTCTTATATCTGGATATGTAGGTGTAGATG
AATGTGCAGAGGAAACTGTTTATAGAGAGGTAAAAGAAGAAACAGGAATAACAGTTAAAGATATAAAATATTTAGGTAGT
GATTTTGTAAAGGGAAAAGAATTACTTATGCTAACTTATTTAGCATATTATGAATCAGGAGAAATAGAGAAATCAACTGA
AGTAGAAGGAGCTGCTTGGTACAATATAGAGGATGCTCTTTGTGAATTAAATGAGGATAGCATAGGAAAAAGAGTGGTAA
AAAAAGTTTTAAAAGAAATAAGTTATGAAGGTACTAATGCATTTAGATGTGAAGGAAATAATTGTAATGTATAA

Upstream 100 bases:

>100_bases
AGGTAATATATTTGCTTTACTAAAGAAATTAATTATGAAATTTAAATATTGTCCGTTATGTGGTGAAAAATTAGAGTTAA
AGAATAGCTGGGATGAGGGA

Downstream 100 bases:

>100_bases
ATTTTTTTATTAATAATTTTAGTTTATACTATTGCATTATTTGAGATTTTTTAGTAACATTATAAACAATAATTAATATA
ATAAAAGCATAAATAATTTG

Product: hydrolase, NUDIX family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MIPYCSKHDMMFFDLPKPCIVVAVIKGDEIILLKQSYIYENSKVLISGYVGVDECAEETVYREVKEETGITVKDIKYLGS
DFVKGKELLMLTYLAYYESGEIEKSTEVEGAAWYNIEDALCELNEDSIGKRVVKKVLKEISYEGTNAFRCEGNNCNV

Sequences:

>Translated_157_residues
MIPYCSKHDMMFFDLPKPCIVVAVIKGDEIILLKQSYIYENSKVLISGYVGVDECAEETVYREVKEETGITVKDIKYLGS
DFVKGKELLMLTYLAYYESGEIEKSTEVEGAAWYNIEDALCELNEDSIGKRVVKKVLKEISYEGTNAFRCEGNNCNV
>Mature_157_residues
MIPYCSKHDMMFFDLPKPCIVVAVIKGDEIILLKQSYIYENSKVLISGYVGVDECAEETVYREVKEETGITVKDIKYLGS
DFVKGKELLMLTYLAYYESGEIEKSTEVEGAAWYNIEDALCELNEDSIGKRVVKKVLKEISYEGTNAFRCEGNNCNV

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI48994995, Length=131, Percent_Identity=30.5343511450382, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 17813; Mature: 17813

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPYCSKHDMMFFDLPKPCIVVAVIKGDEIILLKQSYIYENSKVLISGYVGVDECAEETV
CCCCCCCCCEEEEECCCCEEEEEEECCCEEEEEEHHHEECCCEEEEEECCCHHHHHHHHH
YREVKEETGITVKDIKYLGSDFVKGKELLMLTYLAYYESGEIEKSTEVEGAAWYNIEDAL
HHHHHHHHCCCHHHHHHHCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHH
CELNEDSIGKRVVKKVLKEISYEGTNAFRCEGNNCNV
HHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MIPYCSKHDMMFFDLPKPCIVVAVIKGDEIILLKQSYIYENSKVLISGYVGVDECAEETV
CCCCCCCCCEEEEECCCCEEEEEEECCCEEEEEEHHHEECCCEEEEEECCCHHHHHHHHH
YREVKEETGITVKDIKYLGSDFVKGKELLMLTYLAYYESGEIEKSTEVEGAAWYNIEDAL
HHHHHHHHCCCHHHHHHHCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHH
CELNEDSIGKRVVKKVLKEISYEGTNAFRCEGNNCNV
HHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA