Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is sfsA [H]

Identifier: 18309575

GI number: 18309575

Start: 741120

End: 741812

Strand: Direct

Name: sfsA [H]

Synonym: CPE0593

Alternate gene names: 18309575

Gene position: 741120-741812 (Clockwise)

Preceding gene: 18309574

Following gene: 18309576

Centisome position: 24.45

GC content: 28.86

Gene sequence:

>693_bases
ATGAAGTACAATAGTGTTATCAGAAAAGCTATTTTTTTAAGAAGACCAAATAGATTTCAAGCTTATGTAGTTTTAGATGA
TGAGGAGTTATTAGTTCATGTCCCTAACACTGGAAGGTGTAGAGAGATTTTAAAAGAAGGATGTACAGTTCTTTTAAGAA
AAGGAACTACTCCAAATAGAAAAACTCCGTATGATTTAATTGCAGCTTATAAGGGTGAGGTTTTAATAAATATAGATTCT
CAGATTCCTAATAAAGTTGTAGAAGAGGCATTAAGAAATAAAAAGATAGAAAAGCTAGTAAATTTTAATAATATAAGTAG
AGAAAAAACTTTTGGAAATTCTAGATTTGATTTTAAATTACAAGATGATAATGAAAATACATACTTTTTAGAAGTAAAAG
GGGTAACTTTAGAGGAAAATGGAGAGACTAGGTTTCCAGATGCTCCAACTGAAAGAGGAAAGAAACACATATTAGAACTG
ATTGAAATTAAAAAATTAGGAATGGGTGCAGGAATAATTTTTTTAATACAGATAGATAATGTAAATAAGTTTTCTCCTAA
TGATGAAACAGATCCTAAGTTTGGGGAAGCATTGAGATTAGCTAAAAAAGAAGGAGTAGATATCTTTGCATATAATTGCA
AAGTTACTGAAGAGGAAATTGAGTTGCTTAATTCTGTAGAAATAGTGTTATAA

Upstream 100 bases:

>100_bases
AAAAGACTCATGTTTTTAATTAACATAGATAAGGAATAAAAAAATTATTAATTTATAACTAAAATTAAAAGTTAAATAAT
ATATAAAGAGGTTACCATAG

Downstream 100 bases:

>100_bases
TTTAAATTTATAGAATTTAAAAGTAGAAGCTGAAATAGCATAAGTTAAAGAATCCATTATTATAAGTTTAGTTTATAGAA
TTTAAAATATAAATATATGT

Product: sugar fermentation stimulation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKYNSVIRKAIFLRRPNRFQAYVVLDDEELLVHVPNTGRCREILKEGCTVLLRKGTTPNRKTPYDLIAAYKGEVLINIDS
QIPNKVVEEALRNKKIEKLVNFNNISREKTFGNSRFDFKLQDDNENTYFLEVKGVTLEENGETRFPDAPTERGKKHILEL
IEIKKLGMGAGIIFLIQIDNVNKFSPNDETDPKFGEALRLAKKEGVDIFAYNCKVTEEEIELLNSVEIVL

Sequences:

>Translated_230_residues
MKYNSVIRKAIFLRRPNRFQAYVVLDDEELLVHVPNTGRCREILKEGCTVLLRKGTTPNRKTPYDLIAAYKGEVLINIDS
QIPNKVVEEALRNKKIEKLVNFNNISREKTFGNSRFDFKLQDDNENTYFLEVKGVTLEENGETRFPDAPTERGKKHILEL
IEIKKLGMGAGIIFLIQIDNVNKFSPNDETDPKFGEALRLAKKEGVDIFAYNCKVTEEEIELLNSVEIVL
>Mature_230_residues
MKYNSVIRKAIFLRRPNRFQAYVVLDDEELLVHVPNTGRCREILKEGCTVLLRKGTTPNRKTPYDLIAAYKGEVLINIDS
QIPNKVVEEALRNKKIEKLVNFNNISREKTFGNSRFDFKLQDDNENTYFLEVKGVTLEENGETRFPDAPTERGKKHILEL
IEIKKLGMGAGIIFLIQIDNVNKFSPNDETDPKFGEALRLAKKEGVDIFAYNCKVTEEEIELLNSVEIVL

Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]

COG id: COG1489

COG function: function code R; DNA-binding protein, stimulates sugar fermentation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sfsA family [H]

Homologues:

Organism=Escherichia coli, GI1786340, Length=235, Percent_Identity=33.6170212765957, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005224 [H]

Pfam domain/function: PF03749 SfsA [H]

EC number: NA

Molecular weight: Translated: 26406; Mature: 26406

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYNSVIRKAIFLRRPNRFQAYVVLDDEELLVHVPNTGRCREILKEGCTVLLRKGTTPNR
CCHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHCCEEEEECCCCCCC
KTPYDLIAAYKGEVLINIDSQIPNKVVEEALRNKKIEKLVNFNNISREKTFGNSRFDFKL
CCCHHHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEEEEE
QDDNENTYFLEVKGVTLEENGETRFPDAPTERGKKHILELIEIKKLGMGAGIIFLIQIDN
ECCCCCEEEEEEECEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
VNKFSPNDETDPKFGEALRLAKKEGVDIFAYNCKVTEEEIELLNSVEIVL
CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHCEEEC
>Mature Secondary Structure
MKYNSVIRKAIFLRRPNRFQAYVVLDDEELLVHVPNTGRCREILKEGCTVLLRKGTTPNR
CCHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHCCEEEEECCCCCCC
KTPYDLIAAYKGEVLINIDSQIPNKVVEEALRNKKIEKLVNFNNISREKTFGNSRFDFKL
CCCHHHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEEEEE
QDDNENTYFLEVKGVTLEENGETRFPDAPTERGKKHILELIEIKKLGMGAGIIFLIQIDN
ECCCCCEEEEEEECEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
VNKFSPNDETDPKFGEALRLAKKEGVDIFAYNCKVTEEEIELLNSVEIVL
CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA