| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is murC [H]
Identifier: 161485639
GI number: 161485639
Start: 2854253
End: 2855653
Strand: Direct
Name: murC [H]
Synonym: CPE2493
Alternate gene names: 161485639
Gene position: 2854253-2855653 (Clockwise)
Preceding gene: 18311442
Following gene: 18311476
Centisome position: 94.16
GC content: 30.76
Gene sequence:
>1401_bases GTGTATATAAGTAAAGGAGTTGATATCTTGTCTTTCGATTTATTAAAAGATATTAATAAAAAAGTTCATTTCATAGGAAT TGGTGGAGTTAGTATGAGTGGCTTAGCTGCTGTATTACTTAACGCTGGTTACAAAGTTTCAGGATCTGATTCAAAAGAAT CAGAAATTACTAATAGATTAAAAGAAGAAGGTGCAAAAATATACATAGGTCACAGTAAAGATAATTTACAAGATGTTGAT GTAGTTGTATATACTGCAGCAATACCTAGCGATAACCCTGAAATAATTAAGGCTAAAGAGGATAATCTTATTTTAATGGA CAGGGCTGAATTTTTAGGACAAATTATGAAAGGTCATAAATTCAATGTTGCTGTCGCTGGAACTCACGGAAAAACTACTA CTACTTCAATGATTTCTCATGTTGCCCTTAGTGCAGATTTAGACCCTACAATATTAGTTGGTGGAGATTTAGACATTATT CATGGAAACTTTAGAGTTGGAAACAGTGAATACTTTATAACAGAAGCTTGTGAATATAAACAAAGTTTCTTAAGATTCTT CCCTTATGTTGGAATAATATTAAACATAGATGCAGACCATCTAGATTTCTATAAGGACATAAACCACATAAAAGATACAT TTAAACAATTCGTTAGACTTATACCTAATGATGGATATATCATAGGAAATGCTGATGATGAAAAAGTTATGGAAGTTCTT GAAGTAGCTAAATGCAATGTATTAACTTATGGAATTAATAATGGGGATATACAAGCTAGAAATATAGAGTTTAATGAAAA AGGTTGTGCTACTTTTGATGTATTTAGAAATGAAGAAAAACTTCTTTCTCTTTCTTTAAATGTACCTGGTATGCATAATG TATCAAACTCATTATCAGCTGTATGTTTAGCAGAAATATTCAATATAAACGCTGATTCAATAGTATCAGGTCTTTCATCC TTTGGAGGAGCTCATAAAAGATTCGAATACAAGGGTACTAAAAATGATATAACTGTTATTGATGATTACGCTCACCACCC TGTTGAAATAAAAGCTACTCTAAGCACAGCTAAAAAAATGAATCACAATAGAATAGTTTGTGTATTCCAACCACATACTT ACACAAGAACAAAAACTCTATTTAATGATTTTGTTAAATGTTTTGATGATTGTGATGAGCTTGTTTTAATGGATATATAC GCAGCTAGAGAAAAAGATTTAGGTGAAATAAATTCAGATCAATTAGGAGATGCTATAAGAGCTCATGGAGTTAAATGTAC AAATGTACACTCTCATGAAGAAGCATTAGAATATGTAAATGCTAACTTATCAAAAGGTGACTTACTTTTAACAGTTGGAG CTGGTGATGTAGTTAAAGTTGGTGAACTTTTTTTAAAGTAA
Upstream 100 bases:
>100_bases TTGTCAGTTATTTTTAGCACTAAACTAAATAAATTTTCATAAAATGATTTTAAAAAGAATTTTTTTGTGTGCTTTTCCAA AAAAGTGTATATAATTATTA
Downstream 100 bases:
>100_bases ATTAATTTAAAGACTATTTTATTAAAAAATAGTCTTTTTTTTATTTGCATTCTTATAAAAATAATGTTATCATTTACATG TAGTGATTCTCTCTTTGTAC
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase [H]
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MYISKGVDILSFDLLKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRLKEEGAKIYIGHSKDNLQDVD VVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHKFNVAVAGTHGKTTTTSMISHVALSADLDPTILVGGDLDII HGNFRVGNSEYFITEACEYKQSFLRFFPYVGIILNIDADHLDFYKDINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVL EVAKCNVLTYGINNGDIQARNIEFNEKGCATFDVFRNEEKLLSLSLNVPGMHNVSNSLSAVCLAEIFNINADSIVSGLSS FGGAHKRFEYKGTKNDITVIDDYAHHPVEIKATLSTAKKMNHNRIVCVFQPHTYTRTKTLFNDFVKCFDDCDELVLMDIY AAREKDLGEINSDQLGDAIRAHGVKCTNVHSHEEALEYVNANLSKGDLLLTVGAGDVVKVGELFLK
Sequences:
>Translated_466_residues MYISKGVDILSFDLLKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRLKEEGAKIYIGHSKDNLQDVD VVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHKFNVAVAGTHGKTTTTSMISHVALSADLDPTILVGGDLDII HGNFRVGNSEYFITEACEYKQSFLRFFPYVGIILNIDADHLDFYKDINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVL EVAKCNVLTYGINNGDIQARNIEFNEKGCATFDVFRNEEKLLSLSLNVPGMHNVSNSLSAVCLAEIFNINADSIVSGLSS FGGAHKRFEYKGTKNDITVIDDYAHHPVEIKATLSTAKKMNHNRIVCVFQPHTYTRTKTLFNDFVKCFDDCDELVLMDIY AAREKDLGEINSDQLGDAIRAHGVKCTNVHSHEEALEYVNANLSKGDLLLTVGAGDVVKVGELFLK >Mature_466_residues MYISKGVDILSFDLLKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRLKEEGAKIYIGHSKDNLQDVD VVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHKFNVAVAGTHGKTTTTSMISHVALSADLDPTILVGGDLDII HGNFRVGNSEYFITEACEYKQSFLRFFPYVGIILNIDADHLDFYKDINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVL EVAKCNVLTYGINNGDIQARNIEFNEKGCATFDVFRNEEKLLSLSLNVPGMHNVSNSLSAVCLAEIFNINADSIVSGLSS FGGAHKRFEYKGTKNDITVIDDYAHHPVEIKATLSTAKKMNHNRIVCVFQPHTYTRTKTLFNDFVKCFDDCDELVLMDIY AAREKDLGEINSDQLGDAIRAHGVKCTNVHSHEEALEYVNANLSKGDLLLTVGAGDVVKVGELFLK
Specific function: Cell wall formation [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786279, Length=456, Percent_Identity=35.7456140350877, Blast_Score=251, Evalue=6e-68, Organism=Escherichia coli, GI1790680, Length=394, Percent_Identity=28.4263959390863, Blast_Score=175, Evalue=5e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.8 [H]
Molecular weight: Translated: 51487; Mature: 51487
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYISKGVDILSFDLLKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRL CCCCCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHH KEEGAKIYIGHSKDNLQDVDVVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHK HHCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEECCCCEEEEEHHHHHHHHHCCCE FNVAVAGTHGKTTTTSMISHVALSADLDPTILVGGDLDIIHGNFRVGNSEYFITEACEYK EEEEEECCCCCCHHHHHHHHHHEECCCCCEEEECCCEEEEECCEEECCCCEEEEHHHHHH QSFLRFFPYVGIILNIDADHLDFYKDINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVL HHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHH EVAKCNVLTYGINNGDIQARNIEFNEKGCATFDVFRNEEKLLSLSLNVPGMHNVSNSLSA HHHHCEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHHHH VCLAEIFNINADSIVSGLSSFGGAHKRFEYKGTKNDITVIDDYAHHPVEIKATLSTAKKM HHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCCEEEEEEHHHHHHC NHNRIVCVFQPHTYTRTKTLFNDFVKCFDDCDELVLMDIYAAREKDLGEINSDQLGDAIR CCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AHGVKCTNVHSHEEALEYVNANLSKGDLLLTVGAGDVVKVGELFLK HCCCEEECCCCHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCC >Mature Secondary Structure MYISKGVDILSFDLLKDINKKVHFIGIGGVSMSGLAAVLLNAGYKVSGSDSKESEITNRL CCCCCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHH KEEGAKIYIGHSKDNLQDVDVVVYTAAIPSDNPEIIKAKEDNLILMDRAEFLGQIMKGHK HHCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEECCCCEEEEEHHHHHHHHHCCCE FNVAVAGTHGKTTTTSMISHVALSADLDPTILVGGDLDIIHGNFRVGNSEYFITEACEYK EEEEEECCCCCCHHHHHHHHHHEECCCCCEEEECCCEEEEECCEEECCCCEEEEHHHHHH QSFLRFFPYVGIILNIDADHLDFYKDINHIKDTFKQFVRLIPNDGYIIGNADDEKVMEVL HHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHH EVAKCNVLTYGINNGDIQARNIEFNEKGCATFDVFRNEEKLLSLSLNVPGMHNVSNSLSA HHHHCEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHHHH VCLAEIFNINADSIVSGLSSFGGAHKRFEYKGTKNDITVIDDYAHHPVEIKATLSTAKKM HHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCCEEEEEEHHHHHHC NHNRIVCVFQPHTYTRTKTLFNDFVKCFDDCDELVLMDIYAAREKDLGEINSDQLGDAIR CCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH AHGVKCTNVHSHEEALEYVNANLSKGDLLLTVGAGDVVKVGELFLK HCCCEEECCCCHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA